RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CDH6P55285 790 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 IRX4P78413 519 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 SGSM1Q2NKQ1 1148 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 PPP6R3Q5H9R7 873 aaPredicted RBP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 WDR49Q8IV35 697 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 ZBTB8OSQ8IWT0 167 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 XYLT2Q9H1B5 865 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 CXorf56Q9H5V9 222 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 NGRNQ9NPE2 291 aaKnown RBP14.33□□□□□ -0.12
BNIP3-202ENST00000540159 FAM49BQ9NUQ9 324 aa14.33□□□□□ -0.12
BNIP3-202ENST00000540159 CCDC195A0A1B0GUA6 201 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 ADM5C9JUS6 153 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 GPR25O00155 361 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 IRF6O14896 467 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 ATP2A1O14983 1001 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 HCRTO43612 131 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 SESN3P58005 492 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 NEDD9Q14511 834 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF667Q5HYK9 610 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 OR6B2Q6IFH4 312 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 DARS2Q6PI48 645 aaKnown RBP14.32□□□□□ -0.12
BNIP3-202ENST00000540159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
BNIP3-202ENST00000540159 LRRC6Q86X45 466 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 PTPRN2Q92932 1015 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 RNPEPQ9H4A4 650 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 H7C0C1 242 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 ATP5OP48047 213 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 CLNS1AP54105 237 aaKnown RBP14.32□□□□□ -0.12
BNIP3-202ENST00000540159 TTLL12Q14166 644 aaPredicted RBP14.32□□□□□ -0.12
BNIP3-202ENST00000540159 MDH1BQ5I0G3 518 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 OTOAQ7RTW8 1153 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 C1orf127Q8N9H9 656 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 P3H4Q92791 437 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 PEBP4Q96S96 227 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 TXNRD2Q9NNW7 524 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 EURLQ9NYK6 297 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 LGALS13Q9UHV8 139 aa14.32□□□□□ -0.12
BNIP3-202ENST00000540159 MAFO75444 373 aaPredicted RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 KDELR1P24390 212 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 EPHB2P29323 1055 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 POLR2BP30876 1174 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ELK3P41970 407 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 SLC25A11Q02978 314 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 LMNB2Q03252 620 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 PIGHQ14442 188 aaPredicted RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 Q3C1V9 767 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 PLEKHG4Q58EX7 1191 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 TRIM68Q6AZZ1 485 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 MTDHQ86UE4 582 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 RFWD2Q8NHY2 731 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 MYCBPQ99417 103 aaPredicted RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 MIS12Q9H081 205 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 SIX4Q9UIU6 781 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 PHIPQ8WWQ0 1821 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 TCRBV5S1A1TA0A578 114 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 LACTBL1A8MY62 500 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 TOP3BO95985 862 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ATXN1P54253 815 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 MKRN3Q13064 507 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 SETDB1Q15047 1291 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 GALNTL6Q49A17 601 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 TAF1BQ53T94 588 aaPredicted RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ZC3H12AQ5D1E8 599 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 UTP4Q969X6 686 aaKnown RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 FAM111AQ96PZ2 611 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ADPGKQ9BRR6 497 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 MECRQ9BV79 373 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ELOVL4Q9GZR5 314 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 FBXO6Q9NRD1 293 aaPredicted RBP14.31□□□□□ -0.12
BNIP3-202ENST00000540159 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 RABGEF1Q9UJ41 708 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 ADAMTS5Q9UNA0 930 aa14.31□□□□□ -0.12
BNIP3-202ENST00000540159 A0A087WZ62 844 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 F7P08709 466 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 KITP10721 976 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 RAD23BP54727 409 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 BMPR2Q13873 1038 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 MORF4L2Q15014 288 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 GLRA4Q5JXX5 417 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 FDXACB1Q9BRP7 624 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 B3GNT5Q9BYG0 378 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 CDT1Q9H211 546 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF395Q9H8N7 513 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 RPF1Q9H9Y2 349 aaKnown RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 PSMC3IPQ9P2W1 217 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 MARCOQ9UEW3 520 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 AKT3Q9Y243 479 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms