RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 KBTBD7Q8WVZ9 684 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 ALG3Q92685 438 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 LPPQ93052 612 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 HLA-CQ95604 372 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.22□□□□□ -0.773e-7■■□□□ 14.3
MDH1-215ENST00000539945 GOLGA2P5Q9HBQ8 144 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 ARGLU1Q9NWB6 273 aaPredicted RBP10.22□□□□□ -0.77
MDH1-215ENST00000539945 EHD2Q9NZN4 543 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 WDR35Q9P2L0 1181 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 CYTH4Q9UIA0 394 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 PCDHA3Q9Y5H8 950 aa10.22□□□□□ -0.77
MDH1-215ENST00000539945 INPPL1O15357 1258 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 HUS1O60921 280 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 ADH1CP00326 375 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RHOXF2BP0C7M4 288 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 WARSP23381 471 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 VARSP26640 1264 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 MAN1A1P33908 653 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 GNL1P36915 607 aaPredicted RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 GABRB2P47870 512 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RBM10P98175 930 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 MBTPS1Q14703 1052 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 BRD3Q15059 726 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 PTPN20Q4JDL3 420 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 GLE1Q53GS7 698 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 ARHGAP17Q68EM7 881 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 PTCRAQ6ISU1 281 aaPredicted RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 WDR93Q6P2C0 686 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 DNAJC24Q6P3W2 148 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 MTERF4Q7Z6M4 381 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 PHLDB2Q86SQ0 1253 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 ACOT1Q86TX2 421 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 ECHDC2Q86YB7 292 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 PDCL2Q8N4E4 241 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 APPL2Q8NEU8 664 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 OR6B3Q8NGW1 331 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RUBCNQ92622 972 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 KRT35Q92764 455 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 C18orf8Q96DM3 657 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RNPC3Q96LT9 517 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 CPXM1Q96SM3 734 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 NAP1L3Q99457 506 aaPredicted RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 RHOXF2Q9BQY4 288 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 TRIM7Q9C029 511 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 SNX25Q9H3E2 840 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RSAD1Q9HA92 442 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RGS18Q9NS28 235 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 RBM12Q9NTZ6 932 aaKnown RBP10.21□□□□□ -0.78
MDH1-215ENST00000539945 MIOSQ9NXC5 875 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 IP6K2Q9UHH9 426 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 OGDHLQ9ULD0 1010 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 NME7Q9Y5B8 376 aa10.21□□□□□ -0.78
MDH1-215ENST00000539945 CCDC151A5D8V7 595 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 SIGLEC16A6NMB1 481 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 A8MXQ7 604 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 CCDC188H7C350 402 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 M0QYV0 167 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 EOMESO95936 686 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 PFKMP08237 780 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 SETSIPP0DME0 302 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 FGFR1P11362 822 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 CCL5P13501 91 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 SELPP16109 830 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 PAX3P23760 479 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 MCM3P25205 808 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 MARCKSL1P49006 195 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 SCNN1GP51170 649 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 AFF1P51825 1210 aaKnown RBP10.2□□□□□ -0.78
MDH1-215ENST00000539945 RNASE9P60153 205 aaKnown RBP10.2□□□□□ -0.78
MDH1-215ENST00000539945 FAM189BP81408 668 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 PDCLQ13371 301 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 NNTQ13423 1086 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 BFSP2Q13515 415 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 SLC24A5Q71RS6 500 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 FAM126BQ8IXS8 530 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 ADGRF2Q8IZF7 708 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 C12orf29Q8N999 325 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.2□□□□□ -0.78
MDH1-215ENST00000539945 DEFB118Q96PH6 123 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 PNKPQ96T60 521 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 MIS12Q9H081 205 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 TSPAN16Q9UKR8 245 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 L1RE1Q9UN81 338 aa10.2□□□□□ -0.78
MDH1-215ENST00000539945 CENPFP49454 3210 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 PCNTO95613 3336 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 C9IYK1 514 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 KRIT1O00522 736 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 PODXLO00592 558 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 CYB561D2O14569 222 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 GABRDO14764 452 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 FGGP02679 453 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 ERBB2P04626 1255 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 PYGMP11217 842 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 HSPA6P17066 643 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 LMO2P25791 158 aa10.19□□□□□ -0.78
MDH1-215ENST00000539945 AARSP49588 968 aaKnown RBP eCLIP10.19□□□□□ -0.78
MDH1-215ENST00000539945 CLCNKBP51801 687 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms