RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 PSMC1P62191 440 aaKnown RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 GAS6Q14393 721 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 PSMD6Q15008 389 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 FAM171BQ6P995 826 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 DENND5BQ6ZUT9 1274 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 TRAPPC11Q7Z392 1133 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 OSTM1Q86WC4 334 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 NELFCDQ8IXH7 590 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 OR6B3Q8NGW1 331 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 OSCP1Q8WVF1 389 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
UBE3B-211ENST00000539843 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 MYLPFQ96A32 169 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 CCDC127Q96BQ5 260 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 SPATA17Q96L03 361 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 P2RY13Q9BPV8 354 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 TRPM5Q9NZQ8 1165 aa16.35■□□□□ 0.21
UBE3B-211ENST00000539843 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 EXOC3O60645 756 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 PDGFRBP09619 1106 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 FAM163BP0C2L3 166 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-211ENST00000539843 ATICP31939 592 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 GNL1P36915 607 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-211ENST00000539843 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 TRIM68Q6AZZ1 485 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 WDR5BQ86VZ2 330 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
UBE3B-211ENST00000539843 ACDQ96AP0 544 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 PKMYT1Q99640 499 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 RTKNQ9BST9 563 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 HPS4Q9NQG7 708 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 ATP8B3O60423 1300 aa16.34■□□□□ 0.21
UBE3B-211ENST00000539843 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 CCDC163A0A0D9SF12 145 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 K7ESF4 209 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 CLIC2O15247 247 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 TACC1O75410 805 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 NFATC1O95644 943 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 F13A1P00488 732 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 CCDC192P0DO97 292 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 HDCP19113 662 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 BDNFP23560 247 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 AP3M2P53677 418 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 CYP24A1Q07973 514 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 BIRC3Q13489 604 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 WDR72Q3MJ13 1102 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 FOXD4L6Q3SYB3 417 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-211ENST00000539843 SHC4Q6S5L8 630 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 FOXD4L3Q6VB84 417 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-211ENST00000539843 EPM2AIP1Q7L775 607 aaPredicted RBP16.33■□□□□ 0.2
UBE3B-211ENST00000539843 CAMKK1Q8N5S9 505 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 MYCBPAPQ8TBZ2 947 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 NETO1Q8TDF5 533 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 KBTBD7Q8WVZ9 684 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 SLITRK1Q96PX8 696 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 ELOVL4Q9GZR5 314 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 ECT2Q9H8V3 914 aa16.33■□□□□ 0.2
UBE3B-211ENST00000539843 A8MXQ7 604 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 RNF40O75150 1001 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 TADA3O75528 432 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 P4HA1P13674 534 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ARSAP15289 507 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 LMO2P25791 158 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 AFMP43652 599 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 PTPRJQ12913 1337 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 USP4Q13107 963 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 PSMD2Q13200 908 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ZNF77Q15935 545 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
UBE3B-211ENST00000539843 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ARL14EPQ8N8R7 260 aaPredicted RBP16.32■□□□□ 0.2
UBE3B-211ENST00000539843 SH3RF2Q8TEC5 729 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 SCFD1Q8WVM8 642 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 CD101Q93033 1021 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
UBE3B-211ENST00000539843 PCED1BQ96HM7 432 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 FAM84AQ96KN4 292 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 BLZF1Q9H2G9 400 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 EXOC1Q9NV70 894 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ARHGAP26Q9UNA1 814 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ZNF292O60281 2723 aa16.32■□□□□ 0.2
UBE3B-211ENST00000539843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-211ENST00000539843 SLC9A3R1O14745 358 aaPredicted RBP16.31■□□□□ 0.2
UBE3B-211ENST00000539843 HRO43593 1189 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 ATP2C2O75185 946 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 RPP40O75818 363 aaKnown RBP16.31■□□□□ 0.2
UBE3B-211ENST00000539843 AKAP3O75969 853 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 KIF20AO95235 890 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 STAU1O95793 577 aaKnown RBP16.31■□□□□ 0.2
UBE3B-211ENST00000539843 ABL1P00519 1130 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 TCF3P15923 654 aa16.31■□□□□ 0.2
UBE3B-211ENST00000539843 GJA4P35212 333 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms