RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 C9orf72Q96LT7 481 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ZMAT2Q96NC0 199 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ZIM3Q96PE6 472 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EHD4Q9H223 541 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 KRCC1Q9NPI7 259 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SEPT3Q9UH03 358 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 DRG1Q9Y295 367 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TMEM120BA0PK00 339 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 F5H5T6 163 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ITPK1Q13572 414 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 C6orf10Q5SRN2 563 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ADCK1Q86TW2 530 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SLC13A5Q86YT5 568 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 PLD3Q8IV08 490 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 BBS7Q8IWZ6 715 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 NUP93Q8N1F7 819 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 HNRNPLLQ8WVV9 542 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 APBB2Q92870 758 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ILKAPQ9H0C8 392 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 PXMP2Q9NR77 195 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 DEAF1O75398 565 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 LSM8O95777 96 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CHRM3P20309 590 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SERPINB8P50452 374 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 POU4F1Q01851 419 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SLFN11Q7Z7L1 901 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EME1Q96AY2 570 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CYFIP2Q96F07 1278 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EMILIN2Q9BXX0 1053 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ABI2Q9NYB9 513 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 HSPA13P48723 471 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 STX5Q13190 355 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CHI3L2Q15782 390 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ERO1BQ86YB8 467 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 MARCH10Q8NA82 808 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 UBXN6Q9BZV1 441 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ZC4H2Q9NQZ6 224 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 AP1G2O75843 785 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TOMM70O94826 608 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EPHB2P29323 1055 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 BACE1P56817 501 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 MAPK7Q13164 816 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SMAD1Q15797 465 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TRIM65Q6PJ69 517 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 FAM71DQ8N9W8 422 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 UBE2OQ9C0C9 1292 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 AGO4Q9HCK5 861 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 EIF3LQ9Y262 564 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CCT8L1PA6NM43 557 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SLCO1B7G3V0H7 640 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TGM2P21980 687 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 S100A5P33763 92 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ETFBP38117 255 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TGFB2P61812 414 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 MRPL28Q13084 256 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SLC29A2Q14542 456 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ITIH4Q14624 930 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 WLSQ5T9L3 541 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 WDR49Q8IV35 697 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 HERC6Q8IVU3 1022 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ZNF669Q96BR6 464 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ECSITQ9BQ95 431 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 RIMBP3CA6NJZ7 1639 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 RIMBP3BA6NNM3 1639 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 RIMBP3Q9UFD9 1639 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 AIM2O14862 343 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 FBXO21O94952 628 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 GUCA1CO95843 209 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ASS1P00966 412 aaKnown RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 PCYT1AP49585 367 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SKOR1P84550 965 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TROAPQ12815 778 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ITGA9Q13797 1035 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TJAP1Q5JTD0 557 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TRIM69Q86WT6 500 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 C4orf33Q8N1A6 199 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ARRDC4Q8NCT1 418 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ARMC2Q8NEN0 867 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 CERKQ8TCT0 537 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 TMC2Q8TDI7 906 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 ATG4CQ96DT6 458 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 IRX2Q9BZI1 471 aaPredicted RBP6.73□□□□□ -1.33
LSAMP-207ENST00000539563 YIPF3Q9GZM5 350 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 DDIT4Q9NX09 232 aa6.73□□□□□ -1.33
LSAMP-207ENST00000539563 SIGLEC1Q9BZZ2 1709 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ANKRD65E5RJM6 399 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SLC37A4O43826 429 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 KLRC1P26715 233 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 CARSP49589 748 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 RPL10AP62906 217 aaKnown RBP6.72□□□□□ -1.33
LSAMP-207ENST00000539563 GRB10Q13322 594 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 SYCP2LQ5T4T6 812 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 DTX3LQ8TDB6 740 aa6.72□□□□□ -1.33
LSAMP-207ENST00000539563 ACTRT1Q8TDG2 376 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms