RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 COA7Q96BR5 231 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TRIM44Q96DX7 344 aaPredicted RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 RRP36Q96EU6 259 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 PEX11GQ96HA9 241 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 LCORQ96JN0 433 aaPredicted RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 MAELQ96JY0 434 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 JAKMIP1Q96N16 626 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CNPPD1Q9BV87 410 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 JAM3Q9BX67 310 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 QRSL1Q9H0R6 528 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 DHX36Q9H2U1 1008 aaKnown RBP4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 PREBQ9HCU5 417 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 KCNH7Q9NS40 1196 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TBK1Q9UHD2 729 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 MSRAQ9UJ68 235 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 DSEQ9UL01 958 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 STXBP5LQ9Y2K9 1186 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 KNSTRNQ9Y448 316 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 ZNF711Q9Y462 761 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CEP83Q9Y592 693 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 CNTNAP1P78357 1384 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 SPTBN4Q9H254 2564 aa4.22□□□□□ -1.73
AC055720.1-201ENST00000539552 TRPM2O94759 1503 aa4.21□□□□□ -1.73
AC055720.1-201ENST00000539552 A0A1W2PPC4 97 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 LGALS16A8MUM7 142 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 H0Y3Z8 333 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ZNF561-AS1K7EIQ3 104 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 RTCAO00442 366 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 APOL1O14791 398 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 NPC1O15118 1278 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 TMEM63AO94886 807 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 IL18RAPO95256 599 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ADRB2P07550 413 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 HARSP12081 509 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 P4HA1P13674 534 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 HOXD13P35453 343 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 SERPINF1P36955 418 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 TPD52P55327 224 aaPredicted RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 UBASH3AP57075 661 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 RNASE9P60153 205 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MRPS35P82673 323 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 CALD1Q05682 793 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 CYP4F3Q08477 520 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MAPK7Q13164 816 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 DAG1Q14118 895 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ERV3-1Q14264 604 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 BECN1Q14457 450 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 FSCN1Q16658 493 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 INF2Q27J81 1249 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ARL13BQ3SXY8 428 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 PAN2Q504Q3 1202 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 TOR2AQ5JU69 321 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 THEMIS2Q5TEJ8 643 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 HAUS3Q68CZ6 603 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MCTP2Q6DN12 878 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 RPUSD3Q6P087 351 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 FAM180AQ6UWF9 173 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 PHYKPLQ8IUZ5 450 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 TRMT2AQ8IZ69 625 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 AUTS2Q8WXX7 1259 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 NSUN4Q96CB9 384 aaKnown RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MAML3Q96JK9 1138 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 CFAP53Q96M91 514 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 PTPN18Q99952 460 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 PDCD2LQ9BRP1 358 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 PI4K2AQ9BTU6 479 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 AGXT2Q9BYV1 514 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 WNT8AQ9H1J5 351 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 C2orf40Q9H1Z8 148 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 OBP2BQ9NPH6 170 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 HAUS2Q9NVX0 235 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 MARCH2Q9P0N8 246 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ING1Q9UK53 422 aaPredicted RBP4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 ITGB1BP2Q9UKP3 347 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 IKBKGQ9Y6K9 419 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 GPR179Q6PRD1 2367 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 BPTFQ12830 3046 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 DUOX2Q9NRD8 1548 aa4.21□□□□□ -1.74
AC055720.1-201ENST00000539552 QRICH2Q9H0J4 1663 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 PXDNQ92626 1479 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 C22orf46C9J442 243 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 IPO5O00410 1097 aaKnown RBP4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 FGF10O15520 208 aaPredicted RBP4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 CLASP2O75122 1294 aaKnown RBP4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 B3GALNT1O75752 331 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 APOL3O95236 402 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 COL6A2P12110 1019 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 OSMP13725 252 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 CHMP24386 653 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 EEF1GP26641 437 aaKnown RBP4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 ATP5DP30049 168 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 ACTN2P35609 894 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 POLD2P49005 469 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 FNTBP49356 437 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 SELENOPP49908 381 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 HSD17B7P56937 341 aa4.2□□□□□ -1.74
AC055720.1-201ENST00000539552 ARF3P61204 181 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms