RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 FBLN7Q53RD9 439 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 HS1BP3Q53T59 392 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SPECC1Q5M775 1068 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 UBAP2Q5T6F2 1119 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SPATA1Q5VX52 437 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FAM160B1Q5W0V3 765 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FCRL6Q6DN72 434 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MRNIPQ6NTE8 343 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 AADACL2Q6P093 401 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CRELD2Q6UXH1 353 aaPredicted RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 KRTAP5-2Q701N4 177 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MED25Q71SY5 747 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PARS2Q7L3T8 475 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RHOT2Q8IXI1 618 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LNX2Q8N448 690 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 FITM2Q8N6M3 262 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MDGA1Q8NFP4 955 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DNERQ8NFT8 737 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 OR6Y1Q8NGX8 325 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RP9Q8TA86 221 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 THAP4Q8WY91 577 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RAPGEF4Q8WZA2 1011 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NSUN4Q96CB9 384 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LRRC46Q96FV0 321 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PGBD1Q96JS3 809 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CLPTM1LQ96KA5 538 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 WDR92Q96MX6 357 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 PWWP2AQ96N64 755 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TIMP4Q99727 224 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CNPPD1Q9BV87 410 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 MAGEH1Q9H213 219 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 SLAMF7Q9NQ25 335 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 TLR8Q9NR97 1041 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 NKIRAS2Q9NYR9 191 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 IL17BQ9UHF5 180 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 KCNE5Q9UJ90 142 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 CROTQ9UKG9 612 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 LZTS1Q9Y250 596 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 RBM8AQ9Y5S9 174 aaKnown RBP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.24□□□□□ -2.21
HIF1A-204ENST00000539097 DUSP10Q9Y6W6 482 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 AATKQ6ZMQ8 1374 aa1.24□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PQ27 194 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PQ64 194 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PQC6 194 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PQD8 194 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TCRBV21S2A2A0A5A6 115 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CDHR4A6H8M9 788 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PI4K2BG5E9Z4 385 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 H3BUI4 141 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 K7ENM7 598 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NPC1O15118 1278 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 KRT86O43790 486 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ORC4O43929 436 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LPXNO60711 386 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 POLBP06746 335 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CHRM3P20309 590 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 DDCP20711 480 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MATN1P21941 496 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CNTFP26441 200 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NTSR1P30989 418 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SERPINF1P36955 418 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RXRGP48443 463 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 HSPA7P48741 367 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GZMKP49863 264 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SOX8P57073 446 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 HSF1Q00613 529 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ICA1Q05084 483 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PCOLCEQ15113 449 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CNGA2Q16280 664 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ERCC6LQ2NKX8 1250 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ABHD17BQ5VST6 288 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RHOUQ7L0Q8 258 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 OTOP2Q7RTS6 562 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ULK2Q8IYT8 1036 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GALNT15Q8N3T1 639 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ANKRD53Q8N9V6 530 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LINC01356Q8N9X3 169 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 Q8NA96 180 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ATP11CQ8NB49 1132 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TP53I13Q8NBR0 393 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ADPRHL1Q8NDY3 354 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SCAMP5Q8TAC9 235 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM170AQ8WVE7 144 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D20Q96BZ9 403 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NEIL1Q96FI4 390 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TEPSINQ96N21 525 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TOX2Q96NM4 488 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LRRC3BQ96PB8 259 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PPP1R10Q96QC0 940 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 C1QTNF1Q9BXJ1 281 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZFP64Q9NPA5 681 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SLC22A11Q9NSA0 550 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FEZ2Q9UHY8 353 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MRPS17Q9Y2R5 130 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LRRFIP2Q9Y608 721 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 DGKBQ9Y6T7 804 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LEFTY2O00292 366 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF185O15231 689 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ASNA1O43681 348 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms