RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ACVR2BQ13705 512 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 OASLQ15646 514 aaKnown RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 TRABD2AQ86V40 505 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 MCEEQ96PE7 176 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 MRPL4Q9BYD3 311 aaKnown RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 NIF3L1Q9GZT8 377 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 CRISPLD2Q9H0B8 497 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 RXFP1Q9HBX9 757 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 MLXIPLQ9NP71 852 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 KLHL14Q9P2G3 628 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 EFR3BQ9Y2G0 817 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 DNAH12Q6ZR08 3092 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 F8VP50 259 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 MAGEB2O15479 319 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 FARP2O94887 1054 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 CYBAP13498 195 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 TCF4P15884 667 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 TAC1P20366 129 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 GCAP28676 217 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 NCALDP61601 193 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 GPS1Q13098 491 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 TMED2Q15363 201 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 DUOXA2Q1HG44 320 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 RNASEH2BQ5TBB1 312 aaKnown RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 FAM160B1Q5W0V3 765 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 POLNQ7Z5Q5 900 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 PRUNE1Q86TP1 453 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 PCYT2Q99447 389 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 NCAPGQ9BPX3 1015 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 FRMD8P1Q9BZ68 369 aaPredicted RBP15.29■□□□□ 0.04
CDCA3-207ENST00000538862 PHACTR1Q9C0D0 580 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 KLHL11Q9NVR0 708 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 SHOC2Q9UQ13 582 aa15.29■□□□□ 0.04
CDCA3-207ENST00000538862 DNAJC25-GNG10A0A024R161 153 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 MSCO60682 206 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 NQO1P15559 274 aaKnown RBP15.28■□□□□ 0.04
CDCA3-207ENST00000538862 PECAM1P16284 738 aaPredicted RBP15.28■□□□□ 0.04
CDCA3-207ENST00000538862 CDKN2BP42772 138 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 MYL6P60660 151 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
CDCA3-207ENST00000538862 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 LHX8Q68G74 356 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 SEPT14Q6ZU15 432 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 PCGF5Q86SE9 256 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 ERICH1Q86X53 443 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 WDTC1Q8N5D0 677 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 GLIS1Q8NBF1 620 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 TINF2Q9BSI4 451 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 ECT2Q9H8V3 914 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 PCDH9Q9HC56 1237 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 STRIP2Q9ULQ0 834 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
CDCA3-207ENST00000538862 CEP83Q9Y592 693 aa15.28■□□□□ 0.04
CDCA3-207ENST00000538862 A0A1B0GUA9 196 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 OGTO15294 1046 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 ASMTLO95671 621 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 UBA1P22314 1058 aaKnown RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 TNFSF9P41273 254 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 ALDH5A1P51649 535 aaPredicted RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 STAT5BP51692 787 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 OGDHQ02218 1023 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 NEDD9Q14511 834 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 IER5Q5VY09 327 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 RGS9BPQ6ZS82 235 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 CENPUQ71F23 418 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 UBE2Q1Q7Z7E8 422 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 TBC1D1Q86TI0 1168 aaPredicted RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 SLC35B2Q8TB61 432 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 DENND1AQ8TEH3 1009 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 PRPF31Q8WWY3 499 aaKnown RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 FGD4Q96M96 766 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.04
CDCA3-207ENST00000538862 SLC24A2Q9UI40 661 aa15.27■□□□□ 0.04
CDCA3-207ENST00000538862 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 ZSCAN5DPP0CG00 497 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 EZRP15311 586 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 SKIV2L2P42285 1042 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 WDR4P57081 412 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 YWHAEP62258 255 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 TRPC3Q13507 836 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 WDR72Q3MJ13 1102 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 CDCA2Q69YH5 1023 aaPredicted RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 CGB2Q6NT52 195 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 PAWRQ96IZ0 340 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 FAM167AQ96KS9 214 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 TCHPQ9BT92 498 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 PITPNM3Q9BZ71 974 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 MTMR12Q9C0I1 747 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 FETUBQ9UGM5 382 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 CPSF3Q9UKF6 684 aaKnown RBP15.27■□□□□ 0.03
CDCA3-207ENST00000538862 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.03
CDCA3-207ENST00000538862 LRRD1A4D1F6 860 aa15.26■□□□□ 0.03
CDCA3-207ENST00000538862 TGFB3P10600 412 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms