RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 BDNFP23560 247 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 TEAD2Q15562 447 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 DPCR1Q3MIW9 517 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 MDH1BQ5I0G3 518 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 TMEM31Q5JXX7 168 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 TANGO2Q6ICL3 276 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 GIPC2Q8TF65 315 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 TNIP3Q96KP6 325 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 WNT16Q9UBV4 365 aa14.6□□□□□ -0.07
CD9-208ENST00000538834 COL4A3Q01955 1670 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 SHISA7A6NL88 538 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 GABRR2P28476 465 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 CDC25CP30307 473 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 VEPH1Q14D04 833 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 STXBP5Q5T5C0 1151 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 SDHAF4Q5VUM1 108 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 SCARA5Q6ZMJ2 495 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 HFE2Q6ZVN8 426 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 SMARCD2Q92925 531 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 RSPRY1Q96DX4 576 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 HNRNPABQ99729 332 aaKnown RBP14.59□□□□□ -0.07
CD9-208ENST00000538834 SLC46A2Q9BY10 475 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 ZNF518BQ9C0D4 1074 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 ELOVL4Q9GZR5 314 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 OBP2AQ9NY56 170 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 ZMYM5Q9UJ78 669 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 CACNA1HO95180 2353 aa14.59□□□□□ -0.07
CD9-208ENST00000538834 MUC6Q6W4X9 2439 aa14.58□□□□□ -0.07
CD9-208ENST00000538834 FAM86C2PA6NEL3 165 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 ARNTLO00327 626 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 CLDN5O00501 218 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 NPR3P17342 541 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 USP46P62068 366 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 KCNH2Q12809 1159 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 DCAF17Q5H9S7 520 aaPredicted RBP14.58□□□□□ -0.08
CD9-208ENST00000538834 TCERG1LQ5VWI1 586 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 SMYD5Q6GMV2 418 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 DPY19L2P1Q6NXN4 242 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 ACOT1Q86TX2 421 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 FAM35AQ86V20 835 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 TTC39CQ8N584 583 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 SLC4A11Q8NBS3 891 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 STKLD1Q8NE28 680 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 LRRC3BQ96PB8 259 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 SMOQ99835 787 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 ARID3AQ99856 593 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 TASP1Q9H6P5 420 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 MMRN2Q9H8L6 949 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 TRPV5Q9NQA5 729 aa14.58□□□□□ -0.08
CD9-208ENST00000538834 KIAA1549LQ6ZVL6 1849 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 KRBA1A5PL33 1030 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 HHLA1C9JL84 531 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 F8VP50 259 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 TRIM66O15016 1216 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 BEST1O76090 585 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 FGFR1OPO95684 399 aaKnown RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 ACO1P21399 889 aaKnown RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 DDX6P26196 483 aaKnown RBP eCLIP14.57□□□□□ -0.08
CD9-208ENST00000538834 RAD23BP54727 409 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 GPC5P78333 572 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 FCHO2Q0JRZ9 810 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 VITQ6UXI7 678 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 MON1AQ86VX9 555 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 MFSD6LQ8IWD5 586 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 C12orf29Q8N999 325 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 EHBP1Q8NDI1 1231 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 ZSCAN18Q8TBC5 510 aaPredicted RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 DDX23Q9BUQ8 820 aaKnown RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 NT5C1AQ9BXI3 368 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 THAP9Q9H5L6 903 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 CISHQ9NSE2 258 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 COMMD8Q9NX08 183 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 GCNT4Q9P109 453 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 UXTQ9UBK9 157 aaPredicted RBP14.57□□□□□ -0.08
CD9-208ENST00000538834 CNTN6Q9UQ52 1028 aa14.57□□□□□ -0.08
CD9-208ENST00000538834 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 OLFM2O95897 454 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 MBD3O95983 291 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 PDGFBP01127 241 aaPredicted RBP14.56□□□□□ -0.08
CD9-208ENST00000538834 ZDHHC11BP0C7U3 371 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 TCF3P15923 654 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 PFKLP17858 780 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 CYP4F8P98187 520 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 CUL2Q13617 745 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 ZNF268Q14587 947 aaPredicted RBP14.56□□□□□ -0.08
CD9-208ENST00000538834 CCDC40Q4G0X9 1142 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 IER5LQ5T953 404 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 DENND5BQ6ZUT9 1274 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 ST13P5Q8NFI4 369 aaPredicted RBP14.56□□□□□ -0.08
CD9-208ENST00000538834 SMARCD1Q96GM5 515 aa14.56□□□□□ -0.08
CD9-208ENST00000538834 KCNK16Q96T55 309 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms