RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 KIF2AO00139 706 aaPredicted RBP18.26■□□□□ 0.51
CLN6-202ENST00000538696 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
CLN6-202ENST00000538696 ADH1AP07327 375 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 TNFAIP3P21580 790 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 CDR1P51861 262 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 GPR17Q13304 367 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 TAF3Q5VWG9 929 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 RNF19BQ6ZMZ0 732 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 C12orf29Q8N999 325 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 MYCBPAPQ8TBZ2 947 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 PGLYRP2Q96PD5 576 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 ZSWIM1Q9BR11 485 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 PACSIN1Q9BY11 444 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 IRX2Q9BZI1 471 aaPredicted RBP18.26■□□□□ 0.51
CLN6-202ENST00000538696 LMCD1Q9NZU5 365 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 NAGPAQ9UK23 515 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 TRANK1O15050 2925 aa18.26■□□□□ 0.51
CLN6-202ENST00000538696 PJA2O43164 708 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CCDC130P13994 396 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CD19P15391 556 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CYP11B1P15538 503 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 BRD2P25440 801 aaKnown RBP18.25■□□□□ 0.51
CLN6-202ENST00000538696 KLRC2P26717 231 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 ETF1P62495 437 aaKnown RBP18.25■□□□□ 0.51
CLN6-202ENST00000538696 DUSP6Q16828 381 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CCDC122Q5T0U0 273 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 SYT10Q6XYQ8 523 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 DNAAF5Q86Y56 855 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 PALB2Q86YC2 1186 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 TFAP2BQ92481 460 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 HEXIM2Q96MH2 286 aaKnown RBP18.25■□□□□ 0.51
CLN6-202ENST00000538696 B3GNT5Q9BYG0 378 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
CLN6-202ENST00000538696 SEPT11Q9NVA2 429 aaKnown RBP18.25■□□□□ 0.51
CLN6-202ENST00000538696 MTCH2Q9Y6C9 303 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CDH23Q9H251 3354 aa18.25■□□□□ 0.51
CLN6-202ENST00000538696 CLDN5O00501 218 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 PER2O15055 1255 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 FANCGO15287 622 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 ABLIM3O94929 683 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 VDRP11473 427 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 POU3F3P20264 500 aaPredicted RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 GNA15P30679 374 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 PDE6CP51160 858 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 CLCN4P51793 760 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 GNG11P61952 73 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 MAPRE1Q15691 268 aaKnown RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 TCEAL5Q5H9L2 206 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 PPP1R26Q5T8A7 1209 aaPredicted RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 ARHGAP17Q68EM7 881 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 ALKBH5Q6P6C2 394 aaKnown RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 PAQR9Q6ZVX9 377 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 RBM23Q86U06 439 aaKnown RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 FUKQ8N0W3 1084 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 SLC22A17Q8WUG5 538 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 ZNF592Q92610 1267 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 WDR24Q96S15 920 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 PCDHB18PQ96TA0 734 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 DNAI2Q9GZS0 605 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 CRISPLD1Q9H336 500 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 AFF4Q9UHB7 1163 aaKnown RBP18.24■□□□□ 0.51
CLN6-202ENST00000538696 FBXW11Q9UKB1 542 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 GUCA1BQ9UMX6 200 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 GREB1Q4ZG55 1949 aa18.24■□□□□ 0.51
CLN6-202ENST00000538696 TGM5O43548 720 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 KIF5CO60282 957 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 GLUD1P00367 558 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 MMEP08473 750 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ADORA2BP29275 332 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 NRIP1P48552 1158 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 FMO1Q01740 532 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ADCY1Q08828 1119 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 KIF5AQ12840 1032 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 NFE2Q16621 373 aaPredicted RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 SGO2Q562F6 1265 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 TPGS2Q68CL5 300 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 LILRA6Q6PI73 481 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 FAM35AQ86V20 835 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SPATA2LQ8IUW3 424 aaPredicted RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 TTC9BQ8N6N2 239 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ATAD1Q8NBU5 361 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ZNF461Q8TAF7 563 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 SLC2A14Q8TDB8 520 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 C2orf15Q8WU43 125 aaKnown RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 DDX1Q92499 740 aaKnown RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 CYFIP2Q96F07 1278 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 HNRNPABQ99729 332 aaKnown RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 TSGA10Q9BZW7 698 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 ZNF518BQ9C0D4 1074 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 TLE6Q9H808 572 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 ABI2Q9NYB9 513 aaPredicted RBP18.23■□□□□ 0.51
CLN6-202ENST00000538696 TAS2R14Q9NYV8 317 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 DNAI1Q9UI46 699 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 PCDHB5Q9Y5E4 795 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 DUSP10Q9Y6W6 482 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 FAM170AA1A519 330 aa18.23■□□□□ 0.51
CLN6-202ENST00000538696 TMCO5BA8MYB1 307 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms