RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DLL1O00548 723 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 NPC1O15118 1278 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ITGB1P05556 798 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CD19P15391 556 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CYLC1P35663 651 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 DPP6P42658 865 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TUBP50607 506 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KIF11P52732 1056 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF132P52740 706 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 COPB1P53618 953 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 COG7P83436 770 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF268Q14587 947 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CLUL1Q15846 466 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CAMK4Q16566 473 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TCP11X2Q5H9J9 407 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TJAP1Q5JTD0 557 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZCCHC8Q6NZY4 707 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SV2AQ7L0J3 742 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TAS1R3Q7RTX0 852 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 C11orf74Q86VG3 221 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CBWD2Q8IUF1 395 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZDHHC14Q8IZN3 488 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MYCBPAPQ8TBZ2 947 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SREK1Q8WXA9 508 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TRMT2BQ96GJ1 504 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ERGIC2Q96RQ1 377 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SH2D3AQ9BRG2 576 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CRACR2AQ9BSW2 395 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 NAA15Q9BXJ9 866 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 STK33Q9BYT3 514 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 INTS2Q9H0H0 1204 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZCWPW1Q9H0M4 648 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KCNH6Q9H252 994 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ADAM7Q9H2U9 754 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CYP4F11Q9HBI6 524 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TLR8Q9NR97 1041 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF446Q9NWS9 450 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TRMT1Q9NXH9 659 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 DDX43Q9NXZ2 648 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KLK14Q9P0G3 267 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 GCNT4Q9P109 453 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CEP72Q9P209 647 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 IMPACTQ9P2X3 320 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 APEX2Q9UBZ4 518 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 FBXW11Q9UKB1 542 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 G3BP2Q9UN86 482 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SLC8A2Q9UPR5 921 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SCINQ9Y6U3 715 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 V9GYY5 206 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SMCHD1A6NHR9 2005 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ITIH6Q6UXX5 1313 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZSWIM8A7E2V4 1837 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 A0A087X0B3 334 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TRAV19A0A0A6YYK7 116 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 A0A1W2PQJ5 194 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 GOLGA8IPA6NC78 632 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 GOLGA8JA6NMD2 632 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 F8VZ95 297 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 BIN1O00499 593 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ABLIM1O14639 778 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PTGESO14684 152 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZSCAN9O15535 394 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LUC7L3O95232 432 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 C4BPAP04003 597 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CYBBP04839 570 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ATF2P15336 505 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 HTR7P34969 479 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ETFBP38117 255 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 UBXN1Q04323 297 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 INCA1Q0VD86 236 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 BST2Q10589 180 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ADAM15Q13444 863 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 BYSLQ13895 437 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LRRC32Q14392 662 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 HIC1Q14526 733 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ARHGAP29Q52LW3 1261 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 KIAA0319Q5VV43 1072 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ANKRD40Q6AI12 368 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 TRMT11Q7Z4G4 463 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 UNC45BQ8IWX7 931 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 RBM12BQ8IXT5 1001 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 HS6ST3Q8IZP7 471 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PPM1KQ8N3J5 372 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LPPQ93052 612 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 VCPIP1Q96JH7 1222 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF668Q96K58 619 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CDX2Q99626 313 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 HNRNPABQ99729 332 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 SH3GL3Q99963 347 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PHF7Q9BWX1 381 aaPredicted RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MTMR12Q9C0I1 747 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MRPL47Q9HD33 250 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 RNF19AQ9NV58 838 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 CLDND1Q9NY35 253 aa3.78□□□□□ -1.8
PTPN22-211ENST00000538253 NXF1Q9UBU9 619 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 LUC7L2Q9Y383 392 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 MRPS23Q9Y3D9 190 aaKnown RBP3.78□□□□□ -1.8
PTPN22-211ENST00000538253 PTPRJQ12913 1337 aa3.78□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms