RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CFAP69A5D8W1 941 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 PI4K2BG5E9Z4 385 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 APOC4-APOC2K7ER74 178 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 SGK1O00141 431 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 MYO1CO00159 1063 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 PRPSAP2O60256 369 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 KPNA6O60684 536 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 GJB6O95452 261 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 NPTXRO95502 500 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ACSL3O95573 720 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 APOC2P02655 101 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 FAM163BP0C2L3 166 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 DARSP14868 501 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 ATP2A2P16615 1042 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 CYP3A5P20815 502 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 KDELR1P24390 212 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 SSTR3P32745 418 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 PHBP35232 272 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 GPD2P43304 727 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 MAGEA4P43358 317 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 MAGEA9P43362 315 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ACADSBP45954 432 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ARSEP51690 589 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 NDST1P52848 882 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 BCAT1P54687 386 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 CDH8P55286 799 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ARL4CP56559 192 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 OGDHQ02218 1023 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 MKRN3Q13064 507 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 MAP2K5Q13163 448 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 AUHQ13825 339 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 PDK2Q15119 407 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 SV2CQ496J9 727 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 MARCH8Q5T0T0 291 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 GJC2Q5T442 439 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 GKAP1Q5VSY0 366 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 ARHGAP17Q68EM7 881 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 TTC19Q6DKK2 380 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 ARCQ7LC44 396 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 TAX1BP1Q86VP1 789 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 CDR2LQ86X02 465 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 TDRPQ86YL5 185 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 PPIL6Q8IXY8 311 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 HACE1Q8IYU2 909 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 KIAA0319LQ8IZA0 1049 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 CACNA2D3Q8IZS8 1091 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 NME8Q8N427 588 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 KCTD6Q8NC69 237 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 CMASQ8NFW8 434 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 SLC35B2Q8TB61 432 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 EPS8L3Q8TE67 593 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 RSAD2Q8WXG1 361 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 SOCS4Q8WXH5 440 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 RAPGEF5Q92565 580 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 HAUS1Q96CS2 278 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ZNF668Q96K58 619 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 HEXIM2Q96MH2 286 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 RBM15Q96T37 977 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP28-206ENST00000538224 PLCD4Q9BRC7 762 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 HERPUD2Q9BSE4 406 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 RASSF4Q9H2L5 321 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ADAMTS10Q9H324 1103 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 ACTR5Q9H9F9 607 aaPredicted RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 PPANQ9NQ55 473 aaKnown RBP6.96□□□□□ -1.3
USP28-206ENST00000538224 AAASQ9NRG9 546 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 KLHL11Q9NVR0 708 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 TSPAN16Q9UKR8 245 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 DNPEPQ9ULA0 475 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 FAM169AQ9Y6X4 670 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 CASP8AP2Q9UKL3 1982 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 SCN1AP35498 2009 aa6.96□□□□□ -1.3
USP28-206ENST00000538224 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 GOLGA6L7A0A1B0GV03 622 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 DCAF8L1A6NGE4 600 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 MANSC4A6NHS7 340 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 C3orf70A6NLC5 250 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 SMIM23A6NLE4 172 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 C2CD4BA6NLJ0 364 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 CLGNO14967 610 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 MDM4O15151 490 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 TP73O15350 636 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 MEFVO15553 781 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 CST8O60676 142 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 GPR32O75388 356 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 SPAG6O75602 509 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 TRUB2O95900 331 aaKnown RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 SMIM10L2AP0DMW4 78 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 SMIM10L2BP0DMW5 78 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 CYP2C9P11712 490 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 KRT10P13645 584 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 KCNE1P15382 129 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 CHN1P15882 459 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 ZFXP17010 805 aaPredicted RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 TGM2P21980 687 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 MIPP30301 263 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 SDC4P31431 198 aa6.95□□□□□ -1.3
USP28-206ENST00000538224 STIP1P31948 543 aaKnown RBP6.95□□□□□ -1.3
USP28-206ENST00000538224 CHKAP35790 457 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms