RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CHI3L2Q15782 390 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 PTGISQ16647 500 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ALFQ53S48 1182 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 MPZL3Q6UWV2 235 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 FAM129AQ9BZQ8 928 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 GTF2A1LQ9UNN4 478 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC22O60826 627 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 CLASP2O75122 1294 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 H2AFYO75367 372 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 FGFR1P11362 822 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ACAT1P24752 427 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 EDEM1Q92611 657 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 VPS50Q96JG6 964 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 ZNF556Q9HAH1 456 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 IARS2Q9NSE4 1012 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 H2AFY2Q9P0M6 372 aaPredicted RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 TRMT6Q9UJA5 497 aaKnown RBP11.64□□□□□ -0.55
LINC00346-201ENST00000538077 DEPDC5O75140 1603 aa11.64□□□□□ -0.55
LINC00346-201ENST00000538077 STX7O15400 261 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 RAD51CO43502 376 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 TRIM16O95361 564 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 PLEKP08567 350 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 FXR1P51114 621 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 SH3BGRP55822 239 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 BEX3Q00994 111 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 TRAPPC12Q8WVT3 735 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 RIT2Q99578 217 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 MRPL1Q9BYD6 325 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CEP41Q9BYV8 373 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 OSBPL8Q9BZF1 889 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 C2orf81A6NN90 581 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 MAFGO15525 162 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 RNASEH1O60930 286 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 GUCA1CO95843 209 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 GLRBP48167 497 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 HIST2H2ACQ16777 129 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 HIST2H2AA3Q6FI13 130 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ERO1BQ86YB8 467 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 SENP6Q9GZR1 1112 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 THP07101 528 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 INPP5AQ14642 412 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 NAB2Q15742 525 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 PHKG1Q16816 387 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 KLHDC7AQ5VTJ3 777 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 LVRNQ6Q4G3 990 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 BTNL9Q6UXG8 535 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 SIX5Q8N196 739 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 MED8Q96G25 268 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 AGPAT3Q9NRZ7 376 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CFAP99D6REC4 459 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC159P0C7I6 412 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CXCL8P10145 99 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ERVK-10P10266 1014 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 DARSP14868 501 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 RPA1P27694 616 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 HNRNPH2P55795 449 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ZNF484Q5JVG2 852 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 DOK6Q6PKX4 331 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 SPATA21Q7Z572 469 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 NT5DC3Q86UY8 548 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 FICDQ9BVA6 458 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ALDH8A1Q9H2A2 487 aaPredicted RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 PAK5Q9P286 719 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 TDRKHQ9Y2W6 561 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 CPS1P31327 1500 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 OTOAQ7RTW8 1153 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 ATG4AQ8WYN0 398 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 INPP5DQ92835 1189 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
LINC00346-201ENST00000538077 AGO4Q9HCK5 861 aaKnown RBP11.63□□□□□ -0.55
LINC00346-201ENST00000538077 PHF20L1A8MW92 1017 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 AP3B1O00203 1094 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 SKAP2O75563 359 aaPredicted RBP11.62□□□□□ -0.55
LINC00346-201ENST00000538077 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC00346-201ENST00000538077 PMS1P54277 932 aaKnown RBP11.62□□□□□ -0.55
LINC00346-201ENST00000538077 ABCE1P61221 599 aaKnown RBP11.62□□□□□ -0.55
LINC00346-201ENST00000538077 VSNL1P62760 191 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 LAMTOR4Q0VGL1 99 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 GRB10Q13322 594 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 GRIK4Q16099 956 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 RABGAP1LQ5R372 815 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
LINC00346-201ENST00000538077 OSBPL1AQ9BXW6 950 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 WWP1Q9H0M0 922 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 SMPD4Q9NXE4 827 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 TMEM150BA6NC51 233 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 P4HA2O15460 535 aa11.62□□□□□ -0.55
LINC00346-201ENST00000538077 ATP5HO75947 161 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms