RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 RABGAP1LQ5R372 815 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 MARVELD2Q8N4S9 558 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 MAML3Q96JK9 1138 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 NSMCE3Q96MG7 304 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 TTC25Q96NG3 672 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 RANBP9Q96S59 729 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 MECRQ9BV79 373 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 HEMGNQ9BXL5 484 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
RTN3-208ENST00000537981 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
RTN3-208ENST00000537981 ZNHIT2Q9UHR6 403 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 GLI3P10071 1580 aa11.17□□□□□ -0.62
RTN3-208ENST00000537981 ZBTB11O95625 1053 aaPredicted RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 ZSCAN5DPP0CG00 497 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 SRGAP2CP0DJJ0 459 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 MYCLP1P12525 358 aaPredicted RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 ETS1P14921 441 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 CD1EP15812 388 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 HSD3B2P26439 372 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 BCAMP50895 628 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 YWHAGP61981 247 aaKnown RBP eCLIP11.16□□□□□ -0.62
RTN3-208ENST00000537981 MFSD10Q14728 455 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 STAT4Q14765 748 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 HPS6Q86YV9 775 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 SIX5Q8N196 739 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TBCKQ8TEA7 893 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 CD101Q93033 1021 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 AK8Q96MA6 479 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 MRPS26Q9BYN8 205 aaKnown RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 OSBPL6Q9BZF3 934 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 PLGRKTQ9HBL7 147 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 AP4B1Q9Y6B7 739 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 PLCH1Q4KWH8 1693 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 DDAH1O94760 285 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 PDE8BO95263 885 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 LDHCP07864 332 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 CYP2C9P11712 490 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ATF2P15336 505 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ITIH2P19823 946 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 NR4A1P22736 598 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 BTDP43251 543 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 CDH15P55291 814 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TSPY1Q01534 308 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 PDIA2Q13087 525 aaKnown RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 OASLQ15646 514 aaKnown RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 HERC4Q5GLZ8 1057 aaPredicted RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 EFHC1Q5JVL4 640 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 SYCP2LQ5T4T6 812 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 DCLRE1AQ6PJP8 1040 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 UTS2BQ765I0 119 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 LPCAT2Q7L5N7 544 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ANKMY2Q8IV38 441 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ERI1Q8IV48 349 aaKnown RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 UBL4BQ8N7F7 174 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TGFBRAP1Q8WUH2 860 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 TTC17Q96AE7 1141 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 SPATA17Q96L03 361 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 EBF4Q9BQW3 602 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 LRRC19Q9H756 370 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 GPAMQ9HCL2 828 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 IL17RBQ9NRM6 502 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.16□□□□□ -0.626e-7■■■■□ 22.6
RTN3-208ENST00000537981 POU2F3Q9UKI9 436 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 CORINQ9Y5Q5 1042 aa11.16□□□□□ -0.62
RTN3-208ENST00000537981 ZNFX1Q9P2E3 1918 aaKnown RBP11.16□□□□□ -0.62
RTN3-208ENST00000537981 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 GNPATO15228 680 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ZMPSTE24O75844 475 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ZBTB7AO95365 584 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 FTLP02792 175 aaPredicted RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 PABPC1P11940 636 aaKnown RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 CYP7A1P22680 504 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 MSX2P35548 267 aaPredicted RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 STAT1P42224 750 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ALCAMQ13740 583 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 LRP8Q14114 963 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 DLGAP5Q15398 846 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ADRM1Q16186 407 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 SHROOM1Q2M3G4 852 aaPredicted RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 PPP6R3Q5H9R7 873 aaPredicted RBP11.15□□□□□ -0.62
RTN3-208ENST00000537981 IZUMO3Q5VZ72 239 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 ZNF398Q8TD17 642 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 VPS50Q96JG6 964 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 MUC3BQ9H195 1237 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 UVRAGQ9P2Y5 699 aa11.15□□□□□ -0.62
RTN3-208ENST00000537981 RABL2BQ9UNT1 228 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms