RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 DRAP1Q14919 205 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 MYLK3Q32MK0 819 aa11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 SLC35C1Q96A29 364 aa11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
SEMA4D-221ENST00000537934 MEIS2O14770 477 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 ZBED4O75132 1171 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 TDP2O95551 362 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SLC5A2P31639 672 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 RAB15P59190 212 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MESDQ14696 234 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 RASA2Q15283 850 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MARVELD2Q8N4S9 558 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 THTPAQ9BU02 230 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SENP6Q9GZR1 1112 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 VPS11Q9H270 941 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MANSC1Q9H8J5 431 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SEPT11Q9NVA2 429 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 LZTS1Q9Y250 596 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 NEU2Q9Y3R4 380 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FADS3Q9Y5Q0 445 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 CENPFP49454 3210 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 CAPN14A8MX76 684 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MATN2O00339 956 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 P4HA2O15460 535 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 AKAP3O75969 853 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 DLDP09622 509 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 CPA2P48052 419 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 ERFP50548 548 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 HMGCS2P54868 508 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 BACE1P56817 501 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 GPC5P78333 572 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 RELAQ04206 551 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FOLH1Q04609 750 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 TRIP13Q15645 432 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 BCL2A1Q16548 175 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 LPCAT4Q643R3 524 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FBXL19Q6PCT2 694 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 TTC7BQ86TV6 843 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 KSR1Q8IVT5 923 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 LPAR1Q92633 364 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 VPS50Q96JG6 964 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 CLPTM1LQ96KA5 538 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 TSSK1BQ9BXA7 367 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FOXP3Q9BZS1 431 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FEM1BQ9UK73 627 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 FAF1Q9UNN5 650 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 HBS1LQ9Y450 684 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 POTECB2RU33 542 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 POC1B-GALNT4F8VUJ3 575 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SLC16A3O15427 465 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 DENRO43583 198 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SLC37A4O43826 429 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 ADCY3O60266 1144 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MTA2O94776 668 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 VGLL4Q14135 290 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 PACS1Q6VY07 963 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 MOB2Q70IA6 237 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 ANKS1BQ7Z6G8 1248 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 TMEM110Q86TL2 294 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 NLRX1Q86UT6 975 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 GDPD5Q8WTR4 605 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 SNX27Q96L92 541 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 GINM1Q9NU53 330 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 KIAA1522Q9P206 1035 aaPredicted RBP11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 DNAJC12Q9UKB3 198 aa11.88□□□□□ -0.51
SEMA4D-221ENST00000537934 PHIPQ8WWQ0 1821 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 A0A1W2PPM1 405 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 TXNDC9O14530 226 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 CLDN3O15551 220 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 CALUO43852 315 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 PEX1O43933 1283 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 FTLP02792 175 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 ADRA1DP25100 572 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 ARL4CP56559 192 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 KIF22Q14807 665 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 CLPPQ16740 277 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 RNF111Q6ZNA4 994 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 FAM160B2Q86V87 743 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 ICA1LQ8NDH6 482 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 FBXO27Q8NI29 283 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
SEMA4D-221ENST00000537934 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms