RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 ARP10275 920 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 APEX1P27695 318 aaKnown RBP7.65□□□□□ -1.18
CCDC60-203ENST00000536742 NRIP1P48552 1158 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 PLCD1P51178 756 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 BCAR1P56945 870 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 TMPRSS15P98073 1019 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 GPNMBQ14956 572 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 BROXQ5VW32 411 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 NFRKBQ6P4R8 1299 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.65□□□□□ -1.18
CCDC60-203ENST00000536742 ESPNLQ6ZVH7 1005 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 LRRC8DQ7L1W4 858 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 LINC01356Q8N9X3 169 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 PRPF38AQ8NAV1 312 aaKnown RBP7.65□□□□□ -1.18
CCDC60-203ENST00000536742 TOP1MTQ969P6 601 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 NECTIN4Q96NY8 510 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 MENTQ9BUN1 341 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 AMNQ9BXJ7 453 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 ZDHHC5Q9C0B5 715 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 UCKL1Q9NWZ5 548 aa7.65□□□□□ -1.18
CCDC60-203ENST00000536742 LAS1LQ9Y4W2 734 aaKnown RBP7.65□□□□□ -1.18
CCDC60-203ENST00000536742 TRIP12Q14669 1992 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 MROH7-TTC4A0A0A0MT08 1334 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 C2CD4DB7Z1M9 353 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 J3QKU1 62 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 CUTAO60888 179 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 GH2P01242 217 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 ZNF28P17035 718 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 MC4RP32245 332 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 LIMK1P53667 647 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 NFATC3Q12968 1075 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 METTL24Q5JXM2 366 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 FAM26FQ5R3K3 315 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 SLFN12LQ6IEE8 588 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 ZBTB44Q8NCP5 570 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 ATP8B4Q8TF62 1192 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 CDCA3Q99618 268 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 LSM14BQ9BX40 385 aaKnown RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 PUS3Q9BZE2 481 aaKnown RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 S1PR5Q9H228 398 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 GPR108Q9NPR9 543 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 GNL3LQ9NVN8 582 aaKnown RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 SPATA6Q9NWH7 488 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 CROTQ9UKG9 612 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 RAB23Q9ULC3 237 aa7.64□□□□□ -1.19
CCDC60-203ENST00000536742 NOC2LQ9Y3T9 749 aaKnown RBP7.64□□□□□ -1.19
CCDC60-203ENST00000536742 SPTA1P02549 2419 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 C9orf118A6NHY6 69 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 PRRG2O14669 202 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 NBNO60934 754 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 KCNK5O95279 499 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 KNG1P01042 644 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 HOXB8P17481 243 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 SARSP49591 514 aaKnown RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 TDGQ13569 410 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 CAMK1Q14012 370 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 PUM3Q15397 648 aaKnown RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 CSRP2Q16527 193 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 SHROOM1Q2M3G4 852 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 SPECC1Q5M775 1068 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 SPTY2D1Q68D10 685 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 LAIR1Q6GTX8 287 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 C19orf48Q6RUI8 117 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 ADGRD2Q7Z7M1 963 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 RBM23Q86U06 439 aaKnown RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 RSAD2Q8WXG1 361 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 ERCC4Q92889 916 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 MAP4K1Q92918 833 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 P2RX5Q93086 422 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 RELTQ969Z4 430 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 IL17RAQ96F46 866 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 ACAP3Q96P50 834 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 KCNC2Q96PR1 638 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 TUBGCP5Q96RT8 1024 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 FAM126AQ9BYI3 521 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-203ENST00000536742 TLE6Q9H808 572 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 DNAJC18Q9H819 358 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 L2HGDHQ9H9P8 463 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 SEMA4GQ9NTN9 838 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 ZSCAN32Q9NX65 697 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 WNT16Q9UBV4 365 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 FTSJ1Q9UET6 329 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 DENND2AQ9ULE3 1009 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 DUSP12Q9UNI6 340 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 DOPEY1Q5JWR5 2465 aa7.63□□□□□ -1.19
CCDC60-203ENST00000536742 TEX15Q9BXT5 2789 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-203ENST00000536742 TRIM13O60858 407 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 FLOT1O75955 427 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 IL18BPO95998 194 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 RETP07949 1114 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 GLRBP48167 497 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 PURAQ00577 322 aaKnown RBP7.62□□□□□ -1.19
CCDC60-203ENST00000536742 SLC6A3Q01959 620 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 TCTN1Q2MV58 587 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 COL28A1Q2UY09 1125 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 CCDC30Q5VVM6 783 aa7.62□□□□□ -1.19
CCDC60-203ENST00000536742 KANK2Q63ZY3 851 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms