RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MED15Q96RN5 788 aa19.16■□□□□ 0.66
CCDC61-201ENST00000536603 APOBEC3GQ9HC16 384 aaKnown RBP19.16■□□□□ 0.66
CCDC61-201ENST00000536603 RAB20Q9NX57 234 aa19.16■□□□□ 0.66
CCDC61-201ENST00000536603 MRPS23Q9Y3D9 190 aaKnown RBP19.16■□□□□ 0.66
CCDC61-201ENST00000536603 COL4A3Q01955 1670 aa19.16■□□□□ 0.66
CCDC61-201ENST00000536603 MED19A0JLT2 244 aaPredicted RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 FGFR1OPO95684 399 aaKnown RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 PTPN1P18031 435 aaKnown RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 CYP2F1P24903 491 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 ASPAP45381 313 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 SLC5A9Q2M3M2 681 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 ZSCAN23Q3MJ62 389 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 PDZD4Q76G19 769 aaPredicted RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 DNAJB7Q7Z6W7 309 aaPredicted RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 GIPC2Q8TF65 315 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 ATRIPQ8WXE1 791 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 MYLPFQ96A32 169 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 LPIN3Q9BQK8 851 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 DPEP3Q9H4B8 488 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 AVENQ9NQS1 362 aaPredicted RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 FBXO4Q9UKT5 387 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 MTF2Q9Y483 593 aaPredicted RBP19.15■□□□□ 0.66
CCDC61-201ENST00000536603 ASB3Q9Y575 518 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 NOTCH4Q99466 2003 aa19.15■□□□□ 0.66
CCDC61-201ENST00000536603 PATJQ8NI35 1801 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 NCAM2O15394 837 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MYL4P12829 197 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 ATF6P18850 670 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 FMO5P49326 533 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 GPR15P49685 360 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 CYP27A1Q02318 531 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MAPRE1Q15691 268 aaKnown RBP19.14■□□□□ 0.65
CCDC61-201ENST00000536603 ZNF528Q3MIS6 628 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MDH1BQ5I0G3 518 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 WDR44Q5JSH3 913 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 PRSS36Q5K4E3 855 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 C4orf50Q6ZRC1 276 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 TPRG1Q6ZUI0 275 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 ITIH5Q86UX2 942 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 CREBRFQ8IUR6 639 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 NPAS3Q8IXF0 933 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MAML2Q8IZL2 1156 aaPredicted RBP19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MYCBPAPQ8TBZ2 947 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 TCEAL4Q96EI5 215 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MCRS1Q96EZ8 462 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 PCED1BQ96HM7 432 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 FUBP3Q96I24 572 aaKnown RBP eCLIP19.14■□□□□ 0.65
CCDC61-201ENST00000536603 DDX23Q9BUQ8 820 aaKnown RBP19.14■□□□□ 0.65
CCDC61-201ENST00000536603 OSBPL6Q9BZF3 934 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 ABCB6Q9NP58 842 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 LTB4R2Q9NPC1 389 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 ASAH2Q9NR71 780 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 MAGEC2Q9UBF1 373 aaPredicted RBP19.14■□□□□ 0.65
CCDC61-201ENST00000536603 DACH1Q9UI36 760 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 COQ4Q9Y3A0 265 aa19.14■□□□□ 0.65
CCDC61-201ENST00000536603 DCHS1Q96JQ0 3298 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 SYCE3A1L190 88 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 ZNF197O14709 1029 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 CCDC192P0DO97 292 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 CCR2P41597 374 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 MAGEA9P43362 315 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 NDST1P52848 882 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 MARSP56192 900 aaKnown RBP19.13■□□□□ 0.65
CCDC61-201ENST00000536603 VEPH1Q14D04 833 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 TAF12Q16514 161 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 DDR2Q16832 855 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 TPD52L1Q16890 204 aaPredicted RBP19.13■□□□□ 0.65
CCDC61-201ENST00000536603 CFAP221Q4G0U5 840 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 SDHAF4Q5VUM1 108 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 SUMF1Q8NBK3 374 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 LEMD2Q8NC56 503 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 SECISBP2LQ93073 1101 aaKnown RBP19.13■□□□□ 0.65
CCDC61-201ENST00000536603 TATDN2Q93075 761 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 PSMG2Q969U7 264 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 LRRC3Q9BY71 257 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 NIF3L1Q9GZT8 377 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 GVINP1Q7Z2Y8 2422 aa19.13■□□□□ 0.65
CCDC61-201ENST00000536603 GJA1P17302 382 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 CEBPBP17676 345 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 BDNFP23560 247 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 ERCC5P28715 1186 aaPredicted RBP19.12■□□□□ 0.65
CCDC61-201ENST00000536603 EPHA5P54756 1037 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 RPL10AP62906 217 aaKnown RBP19.12■□□□□ 0.65
CCDC61-201ENST00000536603 RSPO4Q2I0M5 234 aaPredicted RBP19.12■□□□□ 0.65
CCDC61-201ENST00000536603 TMC8Q8IU68 726 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 TRIM59Q8IWR1 403 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 SCN4BQ8IWT1 228 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 B3GALNT2Q8NCR0 500 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 TNIP3Q96KP6 325 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 NELL2Q99435 816 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 FUCA2Q9BTY2 467 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 CYP3A43Q9HB55 503 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 ZNF334Q9HCZ1 680 aaPredicted RBP19.12■□□□□ 0.65
CCDC61-201ENST00000536603 MRPS17Q9Y2R5 130 aaKnown RBP19.12■□□□□ 0.65
CCDC61-201ENST00000536603 PCDHGA2Q9Y5H1 932 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 ZNF292O60281 2723 aa19.12■□□□□ 0.65
CCDC61-201ENST00000536603 WDR87Q6ZQQ6 2873 aa19.11■□□□□ 0.65
CCDC61-201ENST00000536603 CACNA1IQ9P0X4 2223 aa19.11■□□□□ 0.65
CCDC61-201ENST00000536603 NRG2O14511 850 aaPredicted RBP19.11■□□□□ 0.65
CCDC61-201ENST00000536603 CD58P19256 250 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms