RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 FAF2Q96CS3 445 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF560Q96MR9 790 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 GRHL1Q9NZI5 618 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ANAPC7Q9UJX3 599 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 OGDHLQ9ULD0 1010 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 HPCAL4Q9UM19 191 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 TCRBV7S2A1N4TA0A589 114 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 C2CD4BA6NLJ0 364 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 HHLA1C9JL84 531 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 HOXD10P28358 340 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RPL9P32969 192 aaKnown RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 PCK1P35558 622 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 MYO1EQ12965 1108 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 PIGHQ14442 188 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 PTGISQ16647 500 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 EMC10Q5UCC4 262 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 OTUD1Q5VV17 481 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 EMBQ6PCB8 327 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ZDHHC24Q6UX98 284 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 ZDHHC17Q8IUH5 632 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 C3orf58Q8NDZ4 430 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 RUNDC3BQ96NL0 473 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 SLITRK1Q96PX8 696 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 NAP1L3Q99457 506 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 C11orf70Q9BRQ4 267 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 NT5C1AQ9BXI3 368 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 EPB41L4BQ9H329 900 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 CSNK1G1Q9HCP0 422 aa8.44□□□□□ -1.06
COL21A1-212ENST00000535941 CHORDC1Q9UHD1 332 aaPredicted RBP8.44□□□□□ -1.06
COL21A1-212ENST00000535941 CCDC189A1A4V9 331 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 KPNA7A9QM74 516 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 C9IYK1 514 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 H0YGN5 161 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 GPR182O15218 404 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 ERLIN1O75477 346 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 CKBP12277 381 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 TCF4P15884 667 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 AKAP5P24588 427 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 IGFBP6P24592 240 aaPredicted RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 HSPA9P38646 679 aaKnown RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 PAFAH1B1P43034 410 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 YARSP54577 528 aaKnown RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 RWDD2BP57060 319 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 CUL1Q13616 776 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 SV2CQ496J9 727 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 LIN9Q5TKA1 542 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 HDXQ7Z353 690 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 HNRNPABQ99729 332 aaKnown RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 NEUROG2Q9H2A3 272 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 ASNSD1Q9NWL6 643 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 IRAK4Q9NWZ3 460 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 NFS1Q9Y697 457 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 ARL5CA6NH57 179 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 SART1O43290 800 aaKnown RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 INHAP05111 366 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 COL6A1P12109 1028 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 CHRNA3P32297 505 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 TNNC1P63316 161 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 FAM171BQ6P995 826 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 DPEP3Q9H4B8 488 aa8.43□□□□□ -1.06
COL21A1-212ENST00000535941 ELAC1Q9H777 363 aaKnown RBP8.43□□□□□ -1.06
COL21A1-212ENST00000535941 DNM1LO00429 736 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 LRCH4O75427 683 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CPP00450 1065 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 FGGP02679 453 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CXCL10P02778 98 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RHOXF2BP0C7M4 288 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RARAP10276 462 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CD58P19256 250 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 HNRNPH1P31943 449 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 EPHB4P54760 987 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 SGO2Q562F6 1265 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF618Q5T7W0 954 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ARMC3Q5W041 872 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 SCARA5Q6ZMJ2 495 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RELL1Q8IUW5 271 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PASD1Q8IV76 773 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RHOT1Q8IXI2 618 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 JOSD2Q8TAC2 188 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 ZNF296Q8WUU4 475 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PSMB7Q99436 277 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 RHOXF2Q9BQY4 288 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TSPYL2Q9H2G4 693 aaPredicted RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 UBN1Q9NPG3 1134 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 SLC38A7Q9NVC3 462 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TSPAN16Q9UKR8 245 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 PADI3Q9ULW8 664 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 MYLKQ15746 1914 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 SYF2O95926 243 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 KLRC2P26717 231 aa8.42□□□□□ -1.06
COL21A1-212ENST00000535941 TKTP29401 623 aaKnown RBP8.42□□□□□ -1.06
COL21A1-212ENST00000535941 CDKN2BP42772 138 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms