RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CEP68Q76N32 757 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 EPM2AIP1Q7L775 607 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 KBTBD6Q86V97 674 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 GPD1LQ8N335 351 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 GIPC2Q8TF65 315 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 FAM213AQ9BRX8 229 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 SMG9Q9H0W8 520 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 KBTBD4Q9NVX7 518 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 IL37Q9NZH6 218 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 GTF3C4Q9UKN8 822 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 SLC8A2Q9UPR5 921 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
CLSTN3-206ENST00000535668 ATG2BQ96BY7 2078 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 FRYQ5TBA9 3013 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 BCLAF3A2AJT9 711 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 AXIN1O15169 862 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 APBB3O95704 486 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 EGFP01133 1207 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ARSAP15289 507 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 HOXD13P35453 343 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 TXLNAP40222 546 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 NASPP49321 788 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 TFAMQ00059 246 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 EHHADHQ08426 723 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 MYO1EQ12965 1108 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 RESTQ13127 1097 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 PSMD2Q13200 908 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 DDR2Q16832 855 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 WDR49Q8IV35 697 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 C12orf56Q8IXR9 622 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ADGRF2Q8IZF7 708 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CSGALNACT2Q8N6G5 542 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ZSWIM2Q8NEG5 633 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 OLIG1Q8TAK6 271 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 MYCBPAPQ8TBZ2 947 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 OVCA2Q8WZ82 227 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CD101Q93033 1021 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 SLC22A12Q96S37 553 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 PI4K2AQ9BTU6 479 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 LRRC27Q9C0I9 530 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ARRDC1-AS1Q9H2J1 176 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 TNMDQ9H2S6 317 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ZHX3Q9H4I2 956 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 PDE11AQ9HCR9 933 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 DUS2Q9NX74 493 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 WASF3Q9UPY6 502 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CLIC4Q9Y696 253 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CACNA1EQ15878 2313 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 ASPMQ8IZT6 3477 aa12.01□□□□□ -0.49
CLSTN3-206ENST00000535668 CACNA1GO43497 2377 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 FAM92AA1XBS5 289 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 ZNF840PA6NDX5 716 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 ZNF233A6NK53 670 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 RHOBTB1O94844 696 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 MPLP40238 635 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 GPR15P49685 360 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 CLDN10P78369 228 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 MRPS21P82921 87 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 ZXDBP98169 803 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 E2F4Q16254 413 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 STPG1Q5TH74 334 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 SCARA3Q6AZY7 606 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 DENND5BQ6ZUT9 1274 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 STXBP4Q6ZWJ1 553 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 DYMQ7RTS9 669 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 GPIHBP1Q8IV16 184 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 RASSF8Q8NHQ8 419 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 OTUB2Q96DC9 234 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 HPDLQ96IR7 371 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 ZSCAN16Q9H4T2 348 aaPredicted RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 CRTAC1Q9NQ79 661 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 CGNQ9P2M7 1197 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 ANGPTL2Q9UKU9 493 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 SNX9Q9Y5X1 595 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 ASCC3Q8N3C0 2202 aaKnown RBP12□□□□□ -0.49
CLSTN3-206ENST00000535668 MYO16Q9Y6X6 1858 aa12□□□□□ -0.49
CLSTN3-206ENST00000535668 A0A087X0B3 334 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 K7EQS6 105 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 SLC9A3R1O14745 358 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 TRIM66O15016 1216 aa11.99□□□□□ -0.49
CLSTN3-206ENST00000535668 GCNT3O95395 438 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms