RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 FERD3LQ96RJ6 166 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 MXD3Q9BW11 206 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 CALN1Q9BXU9 219 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 C6orf62Q9GZU0 229 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-201ENST00000535076 NT5C3AQ9H0P0 336 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 OR51B5Q9H339 312 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 PALMDQ9NP74 551 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 HACD3Q9P035 362 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF624Q9P2J8 865 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-201ENST00000535076 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 DCTN4Q9UJW0 460 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 SNX7Q9UNH6 387 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 ERVK-11Q9UQG0 969 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 PCDHB12Q9Y5F1 795 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 CACNG2Q9Y698 323 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 AK9Q5TCS8 1911 aa5.46□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF335Q9H4Z2 1342 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-201ENST00000535076 CDK13Q14004 1512 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 LOC100653049A0A140TA62 436 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 OR5K3A6NET4 321 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 H0Y626 953 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 L7N2F9 121 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CACNB4O00305 520 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SLC9A3R1O14745 358 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 POLR1CO15160 346 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 POLR2DO15514 142 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TREHO43280 583 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ECE2O60344 883 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GADD45BO75293 160 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GMNNO75496 209 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 KRT34O76011 436 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 USP1O94782 785 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TJP3O95049 919 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CHEK2O96017 543 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ASS1P00966 412 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PRLP01236 227 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 KRT1P04264 644 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 KRT7P08729 469 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PAEPP09466 180 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GSTM1P09488 218 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ATP6V1B1P15313 513 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 VAV1P15498 845 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GAP43P17677 238 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ARF4P18085 180 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PBLDP30039 288 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PPARGP37231 505 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TXKP42681 527 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 VPS41P49754 854 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GDI2P50395 445 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ADCY7P51828 1080 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 STAT2P52630 851 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 RPL26P61254 145 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 UBE2IP63279 158 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 LACTBP83111 547 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 KRT17Q04695 432 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF33BQ06732 778 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SOX4Q06945 474 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 RIPPLY1Q0D2K3 151 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PTK2BQ14289 1009 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ITIH4Q14624 930 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 EZH2Q15910 746 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CYP27C1Q4G0S4 372 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CCDC58Q4VC31 144 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 EXOSC6Q5RKV6 272 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 INTS11Q5TA45 600 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GRTP1Q5TC63 336 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SLX4IPQ5VYV7 408 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 HAUS3Q68CZ6 603 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 NIPAL1Q6NVV3 410 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 MZT2AQ6P582 158 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CYP4V2Q6ZWL3 525 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GATAD2AQ86YP4 633 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 P3H2Q8IVL5 708 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CD302Q8IX05 232 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 PM20D2Q8IYS1 436 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 CACNA2D3Q8IZS8 1091 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ANKS4BQ8N8V4 417 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SLC4A11Q8NBS3 891 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ZNF540Q8NDQ6 660 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 C7orf57Q8NEG2 295 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SHKBP1Q8TBC3 707 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 FANK1Q8TC84 345 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 IFI44Q8TCB0 444 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 STK35Q8TDR2 534 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 GAB3Q8WWW8 586 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 SEPT1Q8WYJ6 367 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 BRF1Q92994 677 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ARL8AQ96BM9 186 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 DGCR14Q96DF8 476 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TRMT2BQ96GJ1 504 aaKnown RBP5.45□□□□□ -1.54
SNHG1-201ENST00000535076 DMRTB1Q96MA1 342 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TSNARE1Q96NA8 513 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 ACAP3Q96P50 834 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 VPS35Q96QK1 796 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 USP28Q96RU2 1077 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 OLFM1Q99784 485 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 DBNDD2Q9BQY9 259 aa5.45□□□□□ -1.54
SNHG1-201ENST00000535076 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms