RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
SCARB1-204ENST00000535005 H3BNC9 293 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 HCRTO43612 131 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 RNF40O75150 1001 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 URODP06132 367 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 GNA15P30679 374 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 KLHL30Q0D2K2 578 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 MTF1Q14872 753 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 CTXN3Q4LDR2 81 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 INTS6LQ5JSJ4 861 aaKnown RBP13.02□□□□□ -0.32
SCARB1-204ENST00000535005 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 ARHGAP17Q68EM7 881 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 KIAA1841Q6NSI8 718 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 MMS22LQ6ZRQ5 1243 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 SPRED2Q7Z698 418 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 ACOT1Q86TX2 421 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 SLC47A2Q86VL8 602 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 OR10T2Q8NGX3 314 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 RIN2Q8WYP3 895 aaPredicted RBP13.02□□□□□ -0.32
SCARB1-204ENST00000535005 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.32
SCARB1-204ENST00000535005 TIFAQ96CG3 184 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.32
SCARB1-204ENST00000535005 ZCWPW1Q9H0M4 648 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.32
SCARB1-204ENST00000535005 IRAK3Q9Y616 596 aa13.02□□□□□ -0.32
SCARB1-204ENST00000535005 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ACAT1P24752 427 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ANXA13P27216 316 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ARHGAP25P42331 645 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 PDE6CP51160 858 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 TSPY1Q01534 308 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 CREMQ03060 361 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ARID5AQ03989 594 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 STILQ15468 1287 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 MAPRE1Q15691 268 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 CNGA2Q16280 664 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 PSMD5Q16401 504 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 SGO2Q562F6 1265 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 SLC8B1Q6J4K2 584 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 SPATS2Q86XZ4 545 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 TFAP2BQ92481 460 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 NCAPGQ9BPX3 1015 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ACP6Q9NPH0 428 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 FNIP2Q9P278 1114 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 ARHGAP20Q9P2F6 1191 aa13.02□□□□□ -0.33
SCARB1-204ENST00000535005 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
SCARB1-204ENST00000535005 SSU72P8A0A1W2PR75 194 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 ATP2C2O75185 946 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 CD19P15391 556 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 CDR2Q01850 454 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 SMARCB1Q12824 385 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 ORC1Q13415 861 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 GPM6BQ13491 265 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC70Q6NSX1 233 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 PRSS55Q6UWB4 352 aaPredicted RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 RSPO2Q6UXX9 243 aaPredicted RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 LRRTM3Q86VH5 581 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 PACS2Q86VP3 889 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 DCP1BQ8IZD4 617 aaKnown RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 COG1Q8WTW3 980 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 POF1BQ8WVV4 589 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 AGPAT1Q99943 283 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 NGRNQ9NPE2 291 aaKnown RBP13.01□□□□□ -0.33
SCARB1-204ENST00000535005 HPCAL4Q9UM19 191 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 PCDHGC3Q9UN70 934 aa13.01□□□□□ -0.33
SCARB1-204ENST00000535005 MYBPHLA2RUH7 354 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 O00370 1275 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 FSCN2O14926 492 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 GRM6O15303 877 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 THAP12O43422 761 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 MED7O43513 233 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 RHOXF2BP0C7M4 288 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CHRNB2P17787 502 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 DNAJB1P25685 340 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 ERVFC1P60507 584 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 ITIH3Q06033 890 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 GPR17Q13304 367 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CAMK1Q14012 370 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 NFE2Q16621 373 aaPredicted RBP13□□□□□ -0.33
SCARB1-204ENST00000535005 PAPD7Q5XG87 772 aaKnown RBP13□□□□□ -0.33
SCARB1-204ENST00000535005 LCLAT1Q6UWP7 414 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF571Q7Z3V5 609 aaPredicted RBP13□□□□□ -0.33
SCARB1-204ENST00000535005 TMC7Q7Z402 723 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms