RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 ERBB2P04626 1255 aa18■□□□□ 0.47
VPS51-216ENST00000534591 BCAT1P54687 386 aa18■□□□□ 0.47
VPS51-216ENST00000534591 RWDD2BP57060 319 aa18■□□□□ 0.47
VPS51-216ENST00000534591 C2orf54Q08AI8 447 aa18■□□□□ 0.47
VPS51-216ENST00000534591 PIGHQ14442 188 aaPredicted RBP18■□□□□ 0.47
VPS51-216ENST00000534591 TMEM240Q5SV17 173 aa18■□□□□ 0.47
VPS51-216ENST00000534591 C3orf58Q8NDZ4 430 aa18■□□□□ 0.47
VPS51-216ENST00000534591 FNIP1Q8TF40 1166 aa18■□□□□ 0.47
VPS51-216ENST00000534591 KRT35Q92764 455 aa18■□□□□ 0.47
VPS51-216ENST00000534591 RNPC3Q96LT9 517 aaKnown RBP18■□□□□ 0.47
VPS51-216ENST00000534591 MCEEQ96PE7 176 aa18■□□□□ 0.47
VPS51-216ENST00000534591 SLC4A5Q9BY07 1137 aa18■□□□□ 0.47
VPS51-216ENST00000534591 CYLDQ9NQC7 956 aa18■□□□□ 0.47
VPS51-216ENST00000534591 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
VPS51-216ENST00000534591 SMARCAL1Q9NZC9 954 aa18■□□□□ 0.47
VPS51-216ENST00000534591 CACNG4Q9UBN1 327 aa18■□□□□ 0.47
VPS51-216ENST00000534591 DSEQ9UL01 958 aa18■□□□□ 0.47
VPS51-216ENST00000534591 TARSL2A2RTX5 802 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 B3GAT3O94766 335 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 ODC1P11926 461 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 KRT3P12035 628 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 PTPN1P18031 435 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 RPL7AP62424 266 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 BST2Q10589 180 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 PPIGQ13427 754 aaKnown RBP eCLIP17.99■□□□□ 0.479e-6■■□□□ 12.8
VPS51-216ENST00000534591 TIGD5Q53EQ6 642 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 GLE1Q53GS7 698 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 CLLU1OSQ5K130 101 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 DCAF12L1Q5VU92 463 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 FAM109BQ6ICB4 259 aaPredicted RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 ZNF365Q70YC5 407 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 Q7L0L9 218 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 TTC30AQ86WT1 665 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 METTL23Q86XA0 190 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 NIPA2Q8N8Q9 360 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 SLC35F5Q8WV83 523 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 HNRNPABQ99729 332 aaKnown RBP17.99■□□□□ 0.47
VPS51-216ENST00000534591 TMEM59LQ9UK28 342 aa17.99■□□□□ 0.47
VPS51-216ENST00000534591 GOLGA8SH3BPF8 625 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CCDC188H7C350 402 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 PSTPIP1O43586 416 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CXCL10P02778 98 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CYP11A1P05108 521 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 PCSK1P29120 753 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 DSC1Q08554 894 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 SEL1L2Q5TEA6 688 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 TMEM110Q86TL2 294 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RHOT1Q8IXI2 618 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 PAAF1Q9BRP4 392 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 PARD6BQ9BYG5 372 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 ANKZF1Q9H8Y5 726 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 IL23AQ9NPF7 189 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 ST7Q9NRC1 585 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RBM12Q9NTZ6 932 aaKnown RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 DDX43Q9NXZ2 648 aaKnown RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 PCDHB7Q9Y5E2 793 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 MICAL3Q7RTP6 2002 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 TMEM189-UBE2V1I3L0A0 370 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 M0QZQ0 153 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 HOXA2O43364 376 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 HCRTO43612 131 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 GJB6O95452 261 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RHOXF2BP0C7M4 288 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 H2AFXP16104 143 aaPredicted RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 IGFBP6P24592 240 aaPredicted RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 MCM3P25205 808 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 ACADSBP45954 432 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RNASE9P60153 205 aaKnown RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 PDE4CQ08493 712 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CD300LGQ6UXG3 332 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CPNE8Q86YQ8 564 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 ZDHHC17Q8IUH5 632 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RUBCNQ92622 972 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 SUSD3Q96L08 255 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RHOXF2Q9BQY4 288 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 CXXC1Q9P0U4 656 aaPredicted RBP17.98■□□□□ 0.47
VPS51-216ENST00000534591 TJP2Q9UDY2 1190 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 RAB21Q9UL25 225 aa17.98■□□□□ 0.47
VPS51-216ENST00000534591 FGGP02679 453 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 CCDC130P13994 396 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 ADORA2BP29275 332 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 RPL34P49207 117 aaKnown RBP17.97■□□□□ 0.47
VPS51-216ENST00000534591 SLC8A3P57103 927 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 ACAP1Q15027 740 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 PPP2R5EQ16537 467 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 LONRF2Q1L5Z9 754 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 PMF1Q6P1K2 205 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 DEFB128Q7Z7B8 93 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 SLC2A14Q8TDB8 520 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 HSFY1Q96LI6 401 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 SYT15Q9BQS2 421 aa17.97■□□□□ 0.47
VPS51-216ENST00000534591 E5RJQ4 531 aa17.96■□□□□ 0.47
VPS51-216ENST00000534591 KRIT1O00522 736 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms