RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
UBXN1-217ENST00000534176 VNN1O95497 513 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 CCNE1P24864 410 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 GDI1P31150 447 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
UBXN1-217ENST00000534176 DLG4P78352 724 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 AMPD2Q01433 879 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 NHLH1Q02575 133 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 DDR2Q16832 855 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 MDH1BQ5I0G3 518 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 VITQ6UXI7 678 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 ZC3H3Q8IXZ2 948 aaKnown RBP16.46■□□□□ 0.23
UBXN1-217ENST00000534176 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 PDZD8Q8NEN9 1154 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 BPIFB1Q8TDL5 484 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 FAM84AQ96KN4 292 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 CEP63Q96MT8 703 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
UBXN1-217ENST00000534176 MAGED2Q9UNF1 606 aaPredicted RBP16.46■□□□□ 0.23
UBXN1-217ENST00000534176 NUP210Q8TEM1 1887 aaPredicted RBP16.46■□□□□ 0.22
UBXN1-217ENST00000534176 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
UBXN1-217ENST00000534176 GNA14O95837 355 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 HLA-DRAP01903 254 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 GJA1P17302 382 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 BDNFP23560 247 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 RPS9P46781 194 aaKnown RBP16.45■□□□□ 0.22
UBXN1-217ENST00000534176 MXI1P50539 228 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 CETN1Q12798 172 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 WDR44Q5JSH3 913 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 IER5LQ5T953 404 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 CRYBG2Q8N1P7 616 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 DTWD2Q8NBA8 298 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 SLITRK1Q96PX8 696 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 TTLL2Q9BWV7 592 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 TDP1Q9NUW8 608 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 ARMCX3Q9UH62 379 aaPredicted RBP16.45■□□□□ 0.22
UBXN1-217ENST00000534176 RAPGEFL1Q9UHV5 662 aa16.45■□□□□ 0.22
UBXN1-217ENST00000534176 TRAV19A0A0A6YYK7 116 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 ATP2C2O75185 946 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 USP17L7P0C7H9 530 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 VIPR2P41587 438 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 GCLMP48507 274 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 INCA1Q0VD86 236 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
UBXN1-217ENST00000534176 TPRG1Q6ZUI0 275 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 FRMD5Q7Z6J6 570 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 SMYD4Q8IYR2 804 aaPredicted RBP16.44■□□□□ 0.22
UBXN1-217ENST00000534176 PRSS33Q8NF86 280 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 PLA2G2FQ9BZM2 168 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
UBXN1-217ENST00000534176 TRPM5Q9NZQ8 1165 aa16.44■□□□□ 0.22
UBXN1-217ENST00000534176 PMM2O15305 246 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-217ENST00000534176 TCF3P15923 654 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 ASPAP45381 313 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
UBXN1-217ENST00000534176 CYP4F8P98187 520 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 TCF15Q12870 199 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 GRM2Q14416 872 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 PPP2R5DQ14738 602 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 SCARA3Q6AZY7 606 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 TMEM150AQ86TG1 271 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-217ENST00000534176 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 MAB21L3Q8N8X9 362 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 STKLD1Q8NE28 680 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 NT5C1AQ9BXI3 368 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 SLC46A2Q9BY10 475 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 SMYD3Q9H7B4 428 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 LTB4R2Q9NPC1 389 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 NCANO14594 1321 aa16.43■□□□□ 0.22
UBXN1-217ENST00000534176 F8VP50 259 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 P4HA2O15460 535 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 TRIM49P0CI25 452 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 TRIM49CP0CI26 452 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 MORC3Q14149 939 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 STXBP5Q5T5C0 1151 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 TCERG1LQ5VWI1 586 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 ANKRD40Q6AI12 368 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 ZC3H14Q6PJT7 736 aaKnown RBP16.42■□□□□ 0.22
UBXN1-217ENST00000534176 POTEHQ6S545 545 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 TAS1R2Q8TE23 839 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 ATOH1Q92858 354 aaPredicted RBP16.42■□□□□ 0.22
UBXN1-217ENST00000534176 CLDN23Q96B33 292 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 SEMA4AQ9H3S1 761 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 FBXO44Q9H4M3 255 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 HEBP1Q9NRV9 189 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
UBXN1-217ENST00000534176 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms