RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 TRIM72Q6ZMU5 477 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 METTL23Q86XA0 190 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 SYCE1Q8N0S2 351 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 SLC4A11Q8NBS3 891 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 IFT81Q8WYA0 676 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 MIS12Q9H081 205 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.1□□□□□ -0.79
RTL1-201ENST00000534062 GOLGA6CA6NDK9 693 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 FAM163BP0C2L3 166 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 GOLGA6DP0CG33 693 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 SOWAHAQ2M3V2 549 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 C1QTNF12Q5T7M4 302 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 CCDC13Q8IYE1 715 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 UBL4BQ8N7F7 174 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 DDX1Q92499 740 aaKnown RBP10.1□□□□□ -0.79
RTL1-201ENST00000534062 HINFPQ9BQA5 517 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 GOLGA6AQ9NYA3 693 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 EHD2Q9NZN4 543 aa10.1□□□□□ -0.79
RTL1-201ENST00000534062 TBKBP1A7MCY6 615 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 NT5C1B-RDH14C9J2C7 533 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 GRAP2O75791 330 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 MICAL2O94851 1124 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 PECAM1P16284 738 aaPredicted RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 PBX3P40426 434 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 NOMO2Q5JPE7 1267 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 MAATS1Q7Z4T9 603 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 NECAB2Q7Z6G3 386 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 MCOLN2Q8IZK6 566 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 C3orf20Q8ND61 904 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 FTHL17Q9BXU8 183 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 C11orf49Q9H6J7 331 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 DDX43Q9NXZ2 648 aaKnown RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 RASAL2Q9UJF2 1139 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 PDE4DIPQ5VU43 2346 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 COQ9O75208 318 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TADA2AO75478 443 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 KIAA0754O94854 1291 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 PYGLP06737 847 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 VDRP11473 427 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 NOMO3P69849 1222 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 SLC5A9Q2M3M2 681 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 ALKAL1Q6UXT8 129 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 GSPT2Q8IYD1 628 aaKnown RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 DNAJC5GQ8N7S2 189 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 BCO2Q9BYV7 579 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 GTF3C4Q9UKN8 822 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 SIP14410 1827 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 F8W810 466 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 ATP2C2O75185 946 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 ZBTB6Q15916 424 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TAF12Q16514 161 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 CCDC142Q17RM4 750 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 PPP1R26Q5T8A7 1209 aaPredicted RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 WDR93Q6P2C0 686 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 RTN4RL1Q86UN2 441 aaPredicted RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 TET1Q8NFU7 2136 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TRIM11Q96F44 468 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TNIP3Q96KP6 325 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 PPP1R10Q96QC0 940 aaKnown RBP10.09□□□□□ -0.79
RTL1-201ENST00000534062 FERMT1Q9BQL6 677 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 TRIM7Q9C029 511 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 ISCUQ9H1K1 167 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 UBN1Q9NPG3 1134 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
RTL1-201ENST00000534062 NDUFAB1O14561 156 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 ACRP10323 421 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 CDK7P50613 346 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 FAAP100Q0VG06 881 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 ZNF211Q13398 564 aaPredicted RBP10.08□□□□□ -0.8
RTL1-201ENST00000534062 TUSC3Q13454 348 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TUBB2AQ13885 445 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 RBBP5Q15291 538 aaKnown RBP10.08□□□□□ -0.8
RTL1-201ENST00000534062 ACCSLQ4AC99 568 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 THEMIS2Q5TEJ8 643 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 DAB2IPQ5VWQ8 1189 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TRIM74Q86UV6 250 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TRIM73Q86UV7 250 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 ZNF280BQ86YH2 543 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TTC39CQ8N584 583 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 COG1Q8WTW3 980 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 PIK3R5Q8WYR1 880 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 MS4A14Q96JA4 679 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 MCEEQ96PE7 176 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TUBB2BQ9BVA1 445 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 PIRO00625 290 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 LCP1P13796 627 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TUBB4BP68371 445 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 MRPS25P82663 173 aaKnown RBP10.08□□□□□ -0.8
RTL1-201ENST00000534062 MDH1BQ5I0G3 518 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
RTL1-201ENST00000534062 SLC43A3Q8NBI5 491 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 SLC2A14Q8TDB8 520 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 FAM149B1Q96BN6 582 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 C18orf8Q96DM3 657 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 OSBPL9Q96SU4 736 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 ZSWIM1Q9BR11 485 aa10.08□□□□□ -0.8
RTL1-201ENST00000534062 MRPL47Q9HD33 250 aaKnown RBP10.08□□□□□ -0.8
RTL1-201ENST00000534062 COG5Q9UP83 839 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms