RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 ADKP55263 362 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 PEX3P56589 373 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 ZNF460Q14592 562 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 MEA1Q16626 185 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 HSDL1Q3SXM5 330 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 E4F1Q66K89 784 aaPredicted RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 ZNF280DQ6N043 979 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 MAEAQ7L5Y9 396 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 HAUS6Q7Z4H7 955 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 STRA8Q7Z7C7 330 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 C11orf96Q7Z7L8 435 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 CCAR2Q8N163 923 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 PPTC7Q8NI37 304 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 NPLOC4Q8TAT6 608 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 SLC35C1Q96A29 364 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 RCC1LQ96I51 464 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 BAG1Q99933 345 aaPredicted RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 ASPNQ9BXN1 380 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 EDEM3Q9BZQ6 932 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 POLR3FQ9H1D9 316 aaPredicted RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 IKZF4Q9H2S9 585 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 ABHD16BQ9H3Z7 469 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 AZI2Q9H6S1 392 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 MLXIPQ9HAP2 919 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 PDGFCQ9NRA1 345 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 ABHD10Q9NUJ1 306 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 SLC5A4Q9NY91 659 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 DDX56Q9NY93 547 aaKnown RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 ARMCX3Q9UH62 379 aaPredicted RBP6.18□□□□□ -1.42
CHKA-208ENST00000533910 CPA4Q9UI42 421 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 CAPN11Q9UMQ6 739 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 TBX20Q9UMR3 447 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.18□□□□□ -1.42
CHKA-208ENST00000533910 FHOD1Q9Y613 1164 aa6.18□□□□□ -1.42
CHKA-208ENST00000533910 EVPLQ92817 2033 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 DENND3A2RUS2 1198 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 GTPBP10A4D1E9 387 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 FAM170BA6NMN3 283 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CLGNO14967 610 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CLIC2O15247 247 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SLC16A4O15374 487 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 MAFO75444 373 aaPredicted RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 OFD1O75665 1012 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 RFPL3O75679 317 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 GH1P01241 217 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 PIGRP01833 764 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 LGALS2P05162 132 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 GLRA2P23416 452 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 HNRNPH3P31942 346 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 PSMC2P35998 433 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 CTSKP43235 329 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 NAMPTP43490 491 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CASP4P49662 377 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 KLK7P49862 253 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 POLGP54098 1239 aaPredicted RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 GFRA1P56159 465 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SOX10P56693 466 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 TBX4P57082 545 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 ZBED6P86452 979 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CDK17Q00537 523 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 ENPEPQ07075 957 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CRHR2Q13324 411 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 PLCB4Q15147 1175 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 PPP2R5AQ15172 486 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 PCBP1Q15365 356 aaKnown RBP eCLIP6.17□□□□□ -1.42
CHKA-208ENST00000533910 DUSP28Q4G0W2 176 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 FNDC3BQ53EP0 1204 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 TMEM63BQ5T3F8 832 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 OLFML2BQ68BL8 750 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CDCA2Q69YH5 1023 aaPredicted RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 DPY19L2P1Q6NXN4 242 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CRTC3Q6UUV7 619 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 KCNT2Q6UVM3 1135 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 DPP9Q86TI2 863 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
CHKA-208ENST00000533910 CREBRFQ8IUR6 639 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 FAM186BQ8IYM0 893 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 FBXL6Q8N531 539 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SOCS4Q8WXH5 440 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 COPS5Q92905 334 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 GATA6Q92908 595 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SCLYQ96I15 445 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 IFT74Q96LB3 600 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SPATA33Q96N06 139 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 RPS6KC1Q96S38 1066 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 KIFC3Q9BVG8 833 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 SMARCAD1Q9H4L7 1026 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 TRIM39Q9HCM9 518 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 KMT5AQ9NQR1 393 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 CHST7Q9NS84 486 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 NRBP2Q9NSY0 501 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 FBXO9Q9UK97 447 aaPredicted RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 G3BP2Q9UN86 482 aaKnown RBP6.17□□□□□ -1.42
CHKA-208ENST00000533910 EXOC7Q9UPT5 735 aa6.17□□□□□ -1.42
CHKA-208ENST00000533910 TNPO3Q9Y5L0 923 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms