RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 EML3Q32P44 896 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 SPATA2LQ8IUW3 424 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-216ENST00000533908 CAMKK1Q8N5S9 505 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 USP28Q96RU2 1077 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 CRTAC1Q9NQ79 661 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 NME7Q9Y5B8 376 aa19.34■□□□□ 0.69
UBXN1-216ENST00000533908 SPAG17Q6Q759 2223 aa19.33■□□□□ 0.69
UBXN1-216ENST00000533908 TRAV19A0A0A6YYK7 116 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 DCLK1O15075 740 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 FOXD2O60548 495 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CCDC192P0DO97 292 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 LIMK1P53667 647 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 USP46P62068 366 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 PSMC1P62191 440 aaKnown RBP19.33■□□□□ 0.68
UBXN1-216ENST00000533908 AMPD2Q01433 879 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 SLC39A14Q15043 492 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 PLK5Q496M5 336 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 AASDHQ4L235 1098 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CBWD2Q8IUF1 395 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 GPD1LQ8N335 351 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CPA6Q8N4T0 437 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 RPLP0P6Q8NHW5 317 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 SPATA18Q8TC71 538 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 SH3RF2Q8TEC5 729 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 DUSP15Q9H1R2 295 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-216ENST00000533908 TMEM206Q9H813 350 aa19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CNOT1A5YKK6 2376 aaKnown RBP19.33■□□□□ 0.68
UBXN1-216ENST00000533908 CKMP06732 381 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 HDCP19113 662 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 PCSK1P29120 753 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 STAT6P42226 847 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 MAGEA11P43364 429 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 ALCAMQ13740 583 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 GAB4Q2WGN9 574 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 SYT13Q7L8C5 426 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 DPH6Q7L8W6 267 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 PDILTQ8N807 584 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 CD101Q93033 1021 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 MYLPFQ96A32 169 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 FUBP3Q96I24 572 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBXN1-216ENST00000533908 HPDLQ96IR7 371 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 SYT15Q9BQS2 421 aa19.32■□□□□ 0.68
UBXN1-216ENST00000533908 UPF2Q9HAU5 1272 aaKnown RBP19.32■□□□□ 0.68
UBXN1-216ENST00000533908 MAP1BP46821 2468 aaKnown RBP19.32■□□□□ 0.68
UBXN1-216ENST00000533908 AKAP3O75969 853 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 PDGFRBP09619 1106 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 TMEM191BP0C7N4 346 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 PDCP20941 246 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 BDNFP23560 247 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 TXLNAP40222 546 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 IFNAR2P48551 515 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 DMC1Q14565 340 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 FBXO43Q4G163 708 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 N4BP2L1Q5TBK1 243 aaPredicted RBP19.31■□□□□ 0.68
UBXN1-216ENST00000533908 TCEAL6Q6IPX3 200 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 C12orf50Q8NA57 414 aaPredicted RBP19.31■□□□□ 0.68
UBXN1-216ENST00000533908 TCEAL3Q969E4 200 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 MAGEC2Q9UBF1 373 aaPredicted RBP19.31■□□□□ 0.68
UBXN1-216ENST00000533908 MTMR6Q9Y217 621 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 INVSQ9Y283 1065 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 MYO16Q9Y6X6 1858 aa19.31■□□□□ 0.68
UBXN1-216ENST00000533908 ZNF233A6NK53 670 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 CST3P01034 146 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-216ENST00000533908 TCF3P15923 654 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 KCNA4P22459 653 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 MPLP40238 635 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 OPRD1P41143 372 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 STPG1Q5TH74 334 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 IL31Q6EBC2 164 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 ATP2A3Q93084 1043 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 ANKRD36BP1Q96IX9 119 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 SPATA17Q96L03 361 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 RNF38Q9H0F5 515 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 EBF1Q9UH73 591 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 CDH9Q9ULB4 789 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 ARHGAP26Q9UNA1 814 aa19.3■□□□□ 0.68
UBXN1-216ENST00000533908 MORC2Q9Y6X9 1032 aaPredicted RBP19.3■□□□□ 0.68
UBXN1-216ENST00000533908 K7EQS6 105 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 WARSP23381 471 aaKnown RBP19.29■□□□□ 0.68
UBXN1-216ENST00000533908 MYO1EQ12965 1108 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 PSMD2Q13200 908 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 DUOXA2Q1HG44 320 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 VSTM1Q6UX27 236 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 PCED1BQ96HM7 432 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 MRPL45Q9BRJ2 306 aaKnown RBP19.29■□□□□ 0.68
UBXN1-216ENST00000533908 TMEM30AQ9NV96 361 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 HSPBP1Q9NZL4 362 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 PCDHGA5Q9Y5G8 931 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 KIAA1549LQ6ZVL6 1849 aa19.29■□□□□ 0.68
UBXN1-216ENST00000533908 TGFB1I1O43294 461 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 APBB3O95704 486 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 GRIK1P39086 918 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 CACNA2D1P54289 1103 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 MESP2Q0VG99 397 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 KCNB1Q14721 858 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 E2F4Q16254 413 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 C4orf50Q6ZRC1 276 aa19.28■□□□□ 0.68
UBXN1-216ENST00000533908 EPM2AIP1Q7L775 607 aaPredicted RBP19.28■□□□□ 0.68
UBXN1-216ENST00000533908 TRAPPC11Q7Z392 1133 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms