RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 LYSMD4Q5XG99 296 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 LMBRD2Q68DH5 695 aaPredicted RBP9.95□□□□□ -0.82
PACS1-214ENST00000533811 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 RASSF3Q86WH2 238 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 SYT12Q8IV01 421 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 CHCHD4Q8N4Q1 142 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 DEFB119Q8N690 84 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 MYCT1Q8N699 235 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 ALLCQ8N6M5 410 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 FRMD1Q8N878 549 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 TXNDC5Q8NBS9 432 aaKnown RBP9.95□□□□□ -0.82
PACS1-214ENST00000533811 SPRYD3Q8NCJ5 442 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 FBXO18Q8NFZ0 1043 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 WHAMMQ8TF30 809 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 HMGB4Q8WW32 186 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 ZNF560Q96MR9 790 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 PNMA5Q96PV4 448 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 TMEM206Q9H813 350 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 TMEM74BQ9NUR3 256 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 DERAQ9Y315 318 aa9.95□□□□□ -0.82
PACS1-214ENST00000533811 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 A0A0B4J269 797 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 C2orf78A6NCI8 922 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 KPNA7A9QM74 516 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 TISP43B9A030 160 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 TNFRSF10BO14763 440 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 NOL4O94818 638 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 ADRB2P07550 413 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 HNRNPLP14866 589 aaKnown RBP eCLIP9.94□□□□□ -0.82
PACS1-214ENST00000533811 ITPKAP23677 461 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 OPRD1P41143 372 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 TOB1P50616 345 aaPredicted RBP9.94□□□□□ -0.82
PACS1-214ENST00000533811 KDSRQ06136 332 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 CCDC142Q17RM4 750 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 ADALQ6DHV7 355 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 SLC39A4Q6P5W5 647 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 GPBP1Q86WP2 473 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 SPATA2LQ8IUW3 424 aaPredicted RBP9.94□□□□□ -0.82
PACS1-214ENST00000533811 SFTPA1Q8IWL2 248 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 FSIP1Q8NA03 581 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 FNBP1Q96RU3 617 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 REEP2Q9BRK0 252 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
PACS1-214ENST00000533811 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
PACS1-214ENST00000533811 MBD1Q9UIS9 605 aaPredicted RBP9.94□□□□□ -0.82
PACS1-214ENST00000533811 C2CD2Q9Y426 696 aa9.94□□□□□ -0.82
PACS1-214ENST00000533811 TCRBV21S2A2A0A5A6 115 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 VWA3AA6NCI4 1184 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 MYMKA6NI61 221 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 ANKRD63C9JTQ0 380 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 H0Y626 953 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 SGK1O00141 431 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 LAD1O00515 517 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 OPHN1O60890 802 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 HUS1O60921 280 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 TRIM16O95361 564 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 PIGRP01833 764 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 APODP05090 189 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 HDCP19113 662 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 POLR2BP30876 1174 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 PRPHP41219 470 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 P2RY2P41231 377 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 FAM193AP78312 1265 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 MRPS21P82921 87 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 MYL7Q01449 175 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 RPL6Q02878 288 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 GFPT1Q06210 699 aaPredicted RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 COL28A1Q2UY09 1125 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 ARSHQ5FYA8 562 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 INTS6LQ5JSJ4 861 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 EOGTQ5NDL2 527 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 EMC10Q5UCC4 262 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 PIP4P1Q86T03 277 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 PROSER1Q86XN7 944 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 PDCL2Q8N4E4 241 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 OR2I1PQ8NGU4 316 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 OLIG1Q8TAK6 271 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 TRMT2BQ96GJ1 504 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 ASB7Q9H672 318 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 PARVGQ9HBI0 331 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 KCND2Q9NZV8 630 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 GCNT4Q9P109 453 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 GTF3C4Q9UKN8 822 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 AGO2Q9UKV8 859 aaKnown RBP9.93□□□□□ -0.82
PACS1-214ENST00000533811 ODF2LQ9ULJ1 636 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 L1RE1Q9UN81 338 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 WDFY3Q8IZQ1 3526 aa9.93□□□□□ -0.82
PACS1-214ENST00000533811 DSPP15924 2871 aaKnown RBP9.92□□□□□ -0.82
PACS1-214ENST00000533811 LEFTY2O00292 366 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 HCRTO43612 131 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 TRAK2O60296 914 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 TBCAO75347 108 aaKnown RBP9.92□□□□□ -0.82
PACS1-214ENST00000533811 ZIC2O95409 532 aaPredicted RBP9.92□□□□□ -0.82
PACS1-214ENST00000533811 ABL1P00519 1130 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 CYP17A1P05093 508 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 DPP6P42658 865 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 SLC6A11P48066 632 aa9.92□□□□□ -0.82
PACS1-214ENST00000533811 HMGN5P82970 282 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms