RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LINC00271P0C7V0 271 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ODC1P11926 461 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 CASQ1P31415 396 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 CTNNB1P35222 781 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 PBX3P40426 434 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 LHX1P48742 406 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC8A3P57103 927 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ERVK-21P61565 698 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 FMO1Q01740 532 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 TUBB2AQ13885 445 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 SGO2Q562F6 1265 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 LIN9Q5TKA1 542 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 DSTYKQ6XUX3 929 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 METTL23Q86XA0 190 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 SYCE1Q8N0S2 351 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF606Q8WXB4 792 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF592Q92610 1267 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 C11orf84Q9BUA3 381 aaPredicted RBP11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 TUBB2BQ9BVA1 445 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ISCUQ9H1K1 167 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ADAM28Q9UKQ2 775 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 STRIP2Q9ULQ0 834 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 PCDHGC3Q9UN70 934 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 MACROD2A1Z1Q3 448 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 A8MXQ7 604 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 NT5C1B-RDH14C9J2C7 533 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 FGF18O76093 207 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 FTLP02792 175 aaPredicted RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 GPC5P78333 572 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 CENPCQ03188 943 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 ELAVL2Q12926 359 aaKnown RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 CLEC16AQ2KHT3 1053 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF394Q53GI3 561 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF569Q5MCW4 686 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 ACAD10Q6JQN1 1059 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 ADGRF2Q8IZF7 708 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 OR6B3Q8NGW1 331 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 LNX1Q8TBB1 728 aaPredicted RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 RFFLQ8WZ73 363 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 DDX1Q92499 740 aaKnown RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 HEXIM2Q96MH2 286 aaKnown RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 C17orf80Q9BSJ5 609 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 LHX5Q9H2C1 402 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 MRPL47Q9HD33 250 aaKnown RBP11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 CACNG4Q9UBN1 327 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 HESX1Q9UBX0 185 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 DNAI1Q9UI46 699 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 MTUS1Q9ULD2 1270 aa11.58□□□□□ -0.55
CCDC90B-218ENST00000533761 SF3B1O75533 1304 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 TMEM265A0A087WTH1 108 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 TMCO5BA8MYB1 307 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 CYB561D2O14569 222 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 CALB1P05937 261 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 PCSK1P29120 753 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 GNL1P36915 607 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 ARHGAP25P42331 645 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 RAP1GAPP47736 663 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 GSK3AP49840 483 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 NDST1P52848 882 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 RAD23BP54727 409 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 GALCP54803 685 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 PLCB3Q01970 1234 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 SYT10Q6XYQ8 523 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 KLHL23Q8NBE8 558 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 ELMO3Q96BJ8 720 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 ZNF576Q9H609 170 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 UVRAGQ9P2Y5 699 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 GTF3C4Q9UKN8 822 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 NENFQ9UMX5 172 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 JRKLQ9Y4A0 524 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 SCINQ9Y6U3 715 aa11.58□□□□□ -0.56
CCDC90B-218ENST00000533761 ARHGEF15O94989 841 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 CYP1A1P04798 512 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 ITGB1P05556 798 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 ABCB4P21439 1286 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 WARSP23381 471 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 CDH8P55286 799 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 UBE3AQ05086 875 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 CNGA2Q16280 664 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 SOWAHAQ2M3V2 549 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 FUT10Q6P4F1 479 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 TMEM173Q86WV6 379 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 SLC4A11Q8NBS3 891 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 C3orf58Q8NDZ4 430 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 HASPINQ8TF76 798 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 ARNTL2Q8WYA1 636 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 NAPGQ99747 312 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 LACRTQ9GZZ8 138 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 SYNCQ9H7C4 482 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 MARCH5Q9NX47 278 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 LZTS1Q9Y250 596 aa11.57□□□□□ -0.56
CCDC90B-218ENST00000533761 STXBP5LQ9Y2K9 1186 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms