RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 VWC2LB2RUY7 222 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 PYCARD-AS1I3L0S3 204 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 CCP110O43303 1012 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 MAP4K4O95819 1239 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 HMGB1P09429 215 aaKnown RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 ZKSCAN1P17029 563 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 NDUFB7P17568 137 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 PEX2P28328 305 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 PDE6CP51160 858 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 DGKEP52429 567 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 NANOS3P60323 173 aaKnown RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 MYO1EQ12965 1108 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 SEMA5AQ13591 1074 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 TBC1D25Q3MII6 688 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 PLA1AQ53H76 456 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 AKNAD1Q5T1N1 836 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 RGS7BPQ6MZT1 257 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 FBXO42Q6P3S6 717 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 ANKRD16Q6P6B7 361 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 MICU3Q86XE3 530 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 ADGRG3Q86Y34 549 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 SMCR8Q8TEV9 937 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 IPCEF1Q8WWN9 437 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 PPP2R3CQ969Q6 453 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 SPSB4Q96A44 273 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 TRIM43Q96BQ3 446 aaPredicted RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 PPP1R9BQ96SB3 815 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 STRBPQ96SI9 672 aaKnown RBP3.35□□□□□ -1.87
ATM-220ENST00000533526 BTBD1Q9H0C5 482 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 BHMT2Q9H2M3 363 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 GLOD4Q9HC38 313 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 DDX21Q9NR30 783 aaKnown RBP eCLIP3.35□□□□□ -1.87
ATM-220ENST00000533526 CPNE7Q9UBL6 633 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 SERTAD3Q9UJW9 196 aa3.35□□□□□ -1.87
ATM-220ENST00000533526 LINC00473A8K010 186 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 RASSF9O75901 435 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 INMTO95050 263 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 IGLV2-14P01704 120 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 RHOP08100 348 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 DLDP09622 509 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 GPD1P21695 349 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 KCNA3P22001 575 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 KLRC1P26715 233 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 PRKAR1BP31321 381 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 PRKAG1P54619 331 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 HSP90AB2PQ58FF8 381 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 ZNF362Q5T0B9 420 aaPredicted RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 DCAF12L1Q5VU92 463 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 CYB5RLQ6IPT4 315 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 MTHFD1LQ6UB35 978 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 PARS2Q7L3T8 475 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 RD3Q7Z3Z2 195 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 COL23A1Q86Y22 540 aaPredicted RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 RAB11FIP4Q86YS3 637 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 SPARTQ8N0X7 666 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 KRT78Q8N1N4 520 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 BOLLQ8N9W6 283 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 FAM98AQ8NCA5 519 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 RP9Q8TA86 221 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 ATG4AQ8WYN0 398 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 RAPGEF4Q8WZA2 1011 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 MSLNLQ96KJ4 702 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 DHX36Q9H2U1 1008 aaKnown RBP3.34□□□□□ -1.87
ATM-220ENST00000533526 SERHLQ9NQF3 203 aa3.34□□□□□ -1.87
ATM-220ENST00000533526 LOC102723971A0A1B0GUV8 181 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 A1L4Q6 167 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 hCG_1984214I3L0E3 225 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 C1RP00736 705 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 PRKCBP05771 671 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 IL6RP08887 468 aaPredicted RBP3.33□□□□□ -1.88
ATM-220ENST00000533526 CD38P28907 300 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 CCT8P50990 548 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 ATXN1P54253 815 aaKnown RBP3.33□□□□□ -1.88
ATM-220ENST00000533526 PDE1AP54750 535 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 NHLH1Q02575 133 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 EIF2B5Q13144 721 aaKnown RBP3.33□□□□□ -1.88
ATM-220ENST00000533526 CCNIQ14094 377 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 SLC29A2Q14542 456 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 AARS2Q5JTZ9 985 aaKnown RBP3.33□□□□□ -1.88
ATM-220ENST00000533526 TREML2Q5T2D2 321 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 CERCAMQ5T4B2 595 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 TSTD2Q5T7W7 516 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 ZNF804AQ7Z570 1209 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 C11orf96Q7Z7L8 435 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 ARHGEF25Q86VW2 580 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 ZNF280BQ86YH2 543 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 YAF2Q8IY57 180 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 IZUMO1Q8IYV9 350 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 ABRAQ8N0Z2 381 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 OR56A3Q8NH54 315 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 BPIFB1Q8TDL5 484 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 OSCP1Q8WVF1 389 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 MAML1Q92585 1016 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 TBC1D5Q92609 795 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 PHKBQ93100 1093 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 RSPRY1Q96DX4 576 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 STK31Q9BXU1 1019 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 TRIM5Q9C035 493 aa3.33□□□□□ -1.88
ATM-220ENST00000533526 UNKQ9C0B0 810 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms