RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 MAP3K13O43283 966 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 GJB3O75712 270 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 SEC24BO95487 1268 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 NFATC1O95644 943 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 CFIP05156 583 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 CKMP06732 381 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 CD44P16070 742 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 CDC25AP30304 524 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 SMTNP53814 917 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ATXN3P54252 364 aaPredicted RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 GFPT1Q06210 699 aaPredicted RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 SLC14A1Q13336 389 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 BYSLQ13895 437 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 TRIM29Q14134 588 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ME3Q16798 604 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 WSCD1Q658N2 575 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 JADE1Q6IE81 842 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 KCNK18Q7Z418 384 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 METTL23Q86XA0 190 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 CD302Q8IX05 232 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 MINDY1Q8N5J2 469 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 NECAB1Q8N987 351 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 IL17RCQ8NAC3 791 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 STKLD1Q8NE28 680 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 SH3RF2Q8TEC5 729 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 LEO1Q8WVC0 666 aaPredicted RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 HNRNPLLQ8WVV9 542 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 YTHDC1Q96MU7 727 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 GTPBP2Q9BX10 602 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 POLMQ9NP87 494 aaPredicted RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 CPSF3Q9UKF6 684 aaKnown RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 MAGED2Q9UNF1 606 aaPredicted RBP8.41□□□□□ -1.06
NXF1-215ENST00000533440 DERAQ9Y315 318 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 ASXL3Q9C0F0 2248 aa8.41□□□□□ -1.06
NXF1-215ENST00000533440 AP5Z1O43299 807 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 SH3BP5O60239 455 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 JAK2O60674 1132 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ADAM23O75077 832 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 PIGRP01833 764 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 NFICP08651 508 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 FTH1P19P0C7X4 201 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.06
NXF1-215ENST00000533440 KIR2DL1P43626 348 aaPredicted RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 TAF6P49848 677 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 FOSBP53539 338 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 NCKAP1LP55160 1127 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ZXDBP98169 803 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 MESP2Q0VG99 397 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 NBR1Q14596 966 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ANKRD1Q15327 319 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 SAFBQ15424 915 aaKnown RBP eCLIP8.4□□□□□ -1.06
NXF1-215ENST00000533440 TRIP6Q15654 476 aaKnown RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 DDR2Q16832 855 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ZC2HC1CQ53FD0 456 aaPredicted RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 TTC38Q5R3I4 469 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 SDHAF4Q5VUM1 108 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 RABEPKQ7Z6M1 372 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 TTC30AQ86WT1 665 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 SFTPA1Q8IWL2 248 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ALLCQ8N6M5 410 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 KIAA1958Q8N8K9 716 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ARL14EPQ8N8R7 260 aaPredicted RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 TXNDC5Q8NBS9 432 aaKnown RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 GLIS3Q8NEA6 775 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 OR2I1PQ8NGU4 316 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 MDM1Q8TC05 714 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 LRRC15Q8TF66 581 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 CAMK1GQ96NX5 476 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 PYM1Q9BRP8 204 aaKnown RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 PI4K2AQ9BTU6 479 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 MMTAG2Q9BU76 263 aaKnown RBP8.4□□□□□ -1.06
NXF1-215ENST00000533440 TRPC7Q9HCX4 862 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ABCB6Q9NP58 842 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 DKK4Q9UBT3 224 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ARHGAP26Q9UNA1 814 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 RAXQ9Y2V3 346 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 C2CD2Q9Y426 696 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 ANAPC1Q9H1A4 1944 aa8.4□□□□□ -1.06
NXF1-215ENST00000533440 URB1O60287 2271 aaKnown RBP8.4□□□□□ -1.07
NXF1-215ENST00000533440 MAST4O15021 2626 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 MYH11P35749 1972 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 KALRNO60229 2985 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 A0A0B4J269 797 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 A0A1W2PQD8 194 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 C2orf78A6NCI8 922 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 EIF4E1BA6NMX2 242 aaKnown RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 PP2D1A8MPX8 630 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 H0YCG3 227 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 HAX1O00165 279 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 KLF8O95600 359 aaPredicted RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 CYP17A1P05093 508 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 SYPP08247 313 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 CYP2F1P24903 491 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 TIE1P35590 1138 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 EIF2DP41214 584 aaKnown RBP8.39□□□□□ -1.07
NXF1-215ENST00000533440 TRAPPC10P48553 1259 aa8.39□□□□□ -1.07
NXF1-215ENST00000533440 LIG4P49917 911 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms