RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 GRAMD1CQ8IYS0 662 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 DCLK2Q8N568 766 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 TTC8Q8TAM2 541 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 RIN3Q8TB24 985 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 ZNF516Q92618 1163 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 USP13Q92995 863 aaPredicted RBP12.1□□□□□ -0.47
CLCF1-202ENST00000533438 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 FAM83CQ9BQN1 747 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 EPC1Q9H2F5 836 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 TDP1Q9NUW8 608 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
CLCF1-202ENST00000533438 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 MYO16Q9Y6X6 1858 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 FAM237AA0A1B0GTK4 181 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 PRR5-ARHGAP8B1AHC4 643 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 TACC1O75410 805 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CMA1P23946 247 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CCR3P51677 355 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 ARHGAP8P85298 464 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CCINQ13939 588 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 LRRC32Q14392 662 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 ZNF268Q14587 947 aaPredicted RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 PPP2R5DQ14738 602 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 PON2Q15165 354 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 MAPRE1Q15691 268 aaKnown RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 ITPRIPL2Q3MIP1 535 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 DGKKQ5KSL6 1271 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 VSTM1Q6UX27 236 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 C4orf50Q6ZRC1 276 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 MON1AQ86VX9 555 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 SPEM1Q8N4L4 309 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CCDC127Q96BQ5 260 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CHFRQ96EP1 664 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 CEP295NLQ96MC4 621 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 THG1LQ9NWX6 298 aaKnown RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 MAGEC2Q9UBF1 373 aaPredicted RBP12.09□□□□□ -0.47
CLCF1-202ENST00000533438 HPSEQ9Y251 543 aa12.09□□□□□ -0.47
CLCF1-202ENST00000533438 OTOL1A6NHN0 477 aaPredicted RBP12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PAPSS2O95340 614 aaPredicted RBP12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PFKFB1P16118 471 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 CXCL12P48061 93 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 NRLP54845 237 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 CLDN10P78369 228 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 SATB1Q01826 763 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 STK4Q13043 487 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 RUNX3Q13761 415 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 Q6ZS52 159 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 SCN4BQ8IWT1 228 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PLEKHO2Q8TD55 490 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 PCED1BQ96HM7 432 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 SLC22A12Q96S37 553 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 MMS19Q96T76 1030 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 MRPL45Q9BRJ2 306 aaKnown RBP12.08□□□□□ -0.48
CLCF1-202ENST00000533438 XYLT2Q9H1B5 865 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 DMAC2Q9NW81 257 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 GPR179Q6PRD1 2367 aa12.08□□□□□ -0.48
CLCF1-202ENST00000533438 A0A1B0GVL5 298 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 K7ESF4 209 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 EXOC3O60645 756 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 MBD3O95983 291 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 BDNFP23560 247 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 ATICP31939 592 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 GNL1P36915 607 aaPredicted RBP12.07□□□□□ -0.48
CLCF1-202ENST00000533438 CASP4P49662 377 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 ATXN1P54253 815 aaKnown RBP12.07□□□□□ -0.48
CLCF1-202ENST00000533438 MYL6P60660 151 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 USP4Q13107 963 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 PSMD2Q13200 908 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 ZNF77Q15935 545 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 WDR72Q3MJ13 1102 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 SYNPOQ8N3V7 929 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 FSIP1Q8NA03 581 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 GOLGA5Q8TBA6 731 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 MYCBPAPQ8TBZ2 947 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 PARD3BQ8TEW8 1205 aa12.07□□□□□ -0.48
CLCF1-202ENST00000533438 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms