RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 UBE2OQ9C0C9 1292 aaKnown RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 ABCB6Q9NP58 842 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 KIAA1257Q9ULG3 409 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 CDH23Q9H251 3354 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 KCNK3O14649 394 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 SYN3O14994 580 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 CYP1A2P05177 515 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 MYOGP15173 224 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 PTPN1P18031 435 aaKnown RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 ELAVL2Q12926 359 aaKnown RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 VARS2Q5ST30 1063 aaKnown RBP19.55■□□□□ 0.72
SMPD1-208ENST00000533123 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 PHLDB2Q86SQ0 1253 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 OR10T2Q8NGX3 314 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 TMEM169Q96HH4 297 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 SYT15Q9BQS2 421 aa19.55■□□□□ 0.72
SMPD1-208ENST00000533123 O00370 1275 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 MED7O43513 233 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 CCDC130P13994 396 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 H2AFXP16104 143 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-208ENST00000533123 FGFR3P22607 806 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 RTP2Q5QGT7 225 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 CCDC181Q5TID7 509 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 THEM5Q8N1Q8 247 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 SPATA18Q8TC71 538 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 SP7Q8TDD2 431 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-208ENST00000533123 BTBD6Q96KE9 485 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 TMEM209Q96SK2 561 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 GDF15Q99988 308 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 PARD6BQ9BYG5 372 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 CRTAC1Q9NQ79 661 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 SPG21Q9NZD8 308 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 CNOT8Q9UFF9 292 aaKnown RBP19.54■□□□□ 0.72
SMPD1-208ENST00000533123 GTF3C4Q9UKN8 822 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 CHD9Q3L8U1 2897 aa19.54■□□□□ 0.72
SMPD1-208ENST00000533123 MYBPHLA2RUH7 354 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 TMEM110-MUSTN1A8MSY1 372 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 OAZ2O95190 189 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 EFEMP2O95967 443 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 PCSK1P29120 753 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 NSFP46459 744 aaKnown RBP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 HADHBP55084 474 aaKnown RBP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 RNASE9P60153 205 aaKnown RBP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 NOMO3P69849 1222 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 CENPCQ03188 943 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 TCEAL1Q15170 157 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 CNGA2Q16280 664 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 MCOLN2Q8IZK6 566 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 CLP1Q92989 425 aaKnown RBP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 ACBD6Q9BR61 282 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 AAASQ9NRG9 546 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 TSPAN16Q9UKR8 245 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 CDH9Q9ULB4 789 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 PCDHGC3Q9UN70 934 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 PCDHB12Q9Y5F1 795 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 KIAA1671Q9BY89 1806 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 MICAL2O94851 1124 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 MDH1BQ5I0G3 518 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 DENND1BQ6P3S1 775 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 ZNF564Q8TBZ8 553 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-208ENST00000533123 HES6Q96HZ4 224 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 PNKPQ96T60 521 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
SMPD1-208ENST00000533123 RRM1P23921 792 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 ZNF572Q7Z3I7 529 aaPredicted RBP19.52■□□□□ 0.72
SMPD1-208ENST00000533123 CPNE8Q86YQ8 564 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 SPATA4Q8NEY3 305 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 UBA3Q8TBC4 463 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 SLC2A14Q8TDB8 520 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 DNAI2Q9GZS0 605 aa19.52■□□□□ 0.72
SMPD1-208ENST00000533123 MTA2O94776 668 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 ADORA2BP29275 332 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 MESDQ14696 234 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 GOLGA7BQ2TAP0 167 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 LCLAT1Q6UWP7 414 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 TRIM72Q6ZMU5 477 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 MON1BQ7L1V2 547 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.71
SMPD1-208ENST00000533123 WDTC1Q8N5D0 677 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 RPGRIP1Q96KN7 1286 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 C11orf70Q9BRQ4 267 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 ALG6Q9Y672 507 aa19.52■□□□□ 0.71
SMPD1-208ENST00000533123 M0QYV0 167 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 CLDN5O00501 218 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 OR4Q2P0C623 313 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 PAFAH1B1P43034 410 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 CLCN6P51797 869 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 USP41Q3LFD5 358 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 CFAP221Q4G0U5 840 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 CTXN3Q4LDR2 81 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 INTS6LQ5JSJ4 861 aaKnown RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 ARHGAP17Q68EM7 881 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 LRRTM3Q86VH5 581 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 C1orf131Q8NDD1 294 aaKnown RBP19.51■□□□□ 0.71
SMPD1-208ENST00000533123 PCED1BQ96HM7 432 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 LINC01553A4QN01 128 aa19.51■□□□□ 0.71
SMPD1-208ENST00000533123 C2CD2LO14523 706 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms