RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 FAF2Q96CS3 445 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM237Q96Q45 408 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 C6orf62Q9GZU0 229 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 DDX47Q9H0S4 455 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PCDH18Q9HCL0 1135 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 EPB41L4AQ9HCS5 686 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 GINM1Q9NU53 330 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 KLHL8Q9P2G9 620 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF221Q9UK13 617 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FEM1BQ9UK73 627 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 EDARQ9UNE0 448 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SIK3Q9Y2K2 1263 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ASMTLO95671 621 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ASS1P00966 412 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FCER1AP12319 257 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SMARCA1P28370 1054 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 KCNJ6P48051 423 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 GDI2P50395 445 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 GPC3P51654 580 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 GRIK3Q13003 919 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 STX5Q13190 355 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF699Q32M78 642 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 WDR45BQ5MNZ6 344 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 WLSQ5T9L3 541 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 STRIP1Q5VSL9 837 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SLC9A4Q6AI14 798 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CLEC17AQ6ZS10 378 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TAF8Q7Z7C8 310 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MAGEC3Q8TD91 643 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 NCLNQ969V3 563 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ASIC4Q96FT7 647 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FAXDC2Q96IV6 333 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM167AQ96KS9 214 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SAYSD1Q9NPB0 183 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 EXOSC4Q9NPD3 245 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF302Q9NR11 478 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 RSL24D1Q9UHA3 163 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MAN1B1Q9UKM7 699 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PCDHA6Q9UN73 950 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PCDHA8Q9Y5H6 950 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CCNKO75909 580 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TCN1P20061 433 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 EXOSC10Q01780 885 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZC2HC1CQ53FD0 456 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 RBM20Q5T481 1227 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 POC5Q8NA72 575 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 DCAF4Q8WV16 495 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SPATA33Q96N06 139 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 RXFP1Q9HBX9 757 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 MOV10Q9HCE1 1003 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM120BA0PK00 339 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZSCAN5CA6NGD5 496 aaPredicted RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TNPO2O14787 897 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ANGPT2O15123 496 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 SYNCRIPO60506 623 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FAM228BP0C875 321 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 RAD23AP54725 363 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 LGALS3BPQ08380 585 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CAPRIN1Q14444 709 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 LBRQ14739 615 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 NEDD8Q15843 81 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ANKS6Q68DC2 871 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ALKBH2Q6NS38 261 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PRPF39Q86UA1 669 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 REXO1L1PQ8IX06 675 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM79Q9BSE2 394 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZSCAN5AQ9BUG6 496 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PI4K2BG5E9Z4 385 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 BMP10O95393 424 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CDC27P30260 824 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 FKBP3Q00688 224 aaKnown RBP7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 EFTUD2Q15029 972 aaKnown RBP eCLIP7.23□□□□□ -1.255e-6■■■■□ 20.9
TGFBR3-210ENST00000533089 SNX17Q15036 470 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 LONRF1Q17RB8 773 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 CCDC28AQ8IWP9 274 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PDCD10Q9BUL8 212 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 OSBPL8Q9BZF1 889 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ABCB10Q9NRK6 738 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF212Q9UDV6 495 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 HACL1Q9UJ83 578 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 TRIM33Q9UPN9 1127 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 N6AMT1Q9Y5N5 214 aa7.23□□□□□ -1.25
TGFBR3-210ENST00000533089 PPP6R2O75170 966 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 MMP1P03956 469 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 IFNA16P05015 189 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 NAT2P11245 290 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 HSPA6P17066 643 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 EPHB2P29323 1055 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 SOX6P35712 828 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 NME3Q13232 169 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 IMPG1Q17R60 797 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TAF1BQ53T94 588 aaPredicted RBP7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ERICH5Q6P6B1 374 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 CLEC4FQ8N1N0 589 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 TSSK1BQ9BXA7 367 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 STK33Q9BYT3 514 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF304Q9HCX3 659 aa7.22□□□□□ -1.25
TGFBR3-210ENST00000533089 A0A1W2PQ27 194 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms