RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TRAV19A0A0A6YYK7 116 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 TGFB1I1O43294 461 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 CST3P01034 146 aaPredicted RBP19.05■□□□□ 0.64
PCF11-206ENST00000533018 USP17L7P0C7H9 530 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 PDIA4P13667 645 aaKnown RBP19.05■□□□□ 0.64
PCF11-206ENST00000533018 ARSAP15289 507 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 BDNFP23560 247 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 ANXA13P27216 316 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 CNNM4Q6P4Q7 775 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 CEP57L1Q8IYX8 460 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 OR6B3Q8NGW1 331 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 SCFD1Q8WVM8 642 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 MYLPFQ96A32 169 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 MYRFLQ96LU7 910 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 C2orf42Q9NWW7 574 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 PCDHA7Q9UN72 937 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 GREB1Q4ZG55 1949 aa19.05■□□□□ 0.64
PCF11-206ENST00000533018 UBE4BO95155 1302 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 OTOL1A6NHN0 477 aaPredicted RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 K7ESF4 209 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 TADA3O75528 432 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 WARSP23381 471 aaKnown RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 GNL1P36915 607 aaPredicted RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 MAGEA11P43364 429 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 TNNC1P63316 161 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 FAM160A1Q05DH4 1040 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 CYP24A1Q07973 514 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 SPEM2Q0P670 501 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 SRSF5Q13243 272 aaKnown RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 TRPC3Q13507 836 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 ZNF268Q14587 947 aaPredicted RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 KCNB1Q14721 858 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 MTF1Q14872 753 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 PSMD6Q15008 389 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 PDGFRLQ15198 375 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 LAIR1Q6GTX8 287 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 LONP2Q86WA8 852 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 ARL14EPQ8N8R7 260 aaPredicted RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 CGRRF1Q99675 332 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 DUS2Q9NX74 493 aaKnown RBP19.04■□□□□ 0.64
PCF11-206ENST00000533018 CFAP45Q9UL16 551 aa19.04■□□□□ 0.64
PCF11-206ENST00000533018 SDK1Q7Z5N4 2213 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 C2orf78A6NCI8 922 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 HRO43593 1189 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 EXOC3O60645 756 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 PHACTR2O75167 634 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 IFNAR2P48551 515 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 SNRPFP62306 86 aaKnown RBP19.03■□□□□ 0.64
PCF11-206ENST00000533018 LMNB2Q03252 620 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 CUL4BQ13620 913 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 WDR72Q3MJ13 1102 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 MDH1BQ5I0G3 518 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 VSTM1Q6UX27 236 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 CEP68Q76N32 757 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.03■□□□□ 0.64
PCF11-206ENST00000533018 GRAMD1CQ8IYS0 662 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 CPA6Q8N4T0 437 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 RIN3Q8TB24 985 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 SLC22A12Q96S37 553 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 MRPL45Q9BRJ2 306 aaKnown RBP19.03■□□□□ 0.64
PCF11-206ENST00000533018 CRTAC1Q9NQ79 661 aa19.03■□□□□ 0.64
PCF11-206ENST00000533018 PTPRDP23468 1912 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 PVALEFA0A1B0GWK0 134 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 TRIM66O15016 1216 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 ATG13O75143 517 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 PAPSS2O95340 614 aaPredicted RBP19.02■□□□□ 0.64
PCF11-206ENST00000533018 HDCP19113 662 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 SDHBP21912 280 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 CNR2P34972 360 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 TMEM196Q5HYL7 178 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 RESP18Q5W5W9 173 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 FSTL4Q6MZW2 842 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 DENND5BQ6ZUT9 1274 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 LIMS2Q7Z4I7 341 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 MYCBPAPQ8TBZ2 947 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 OSCP1Q8WVF1 389 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 EXOC4Q96A65 974 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 PCED1BQ96HM7 432 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 SPATA17Q96L03 361 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 DLL3Q9NYJ7 618 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 TRPM5Q9NZQ8 1165 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.64
PCF11-206ENST00000533018 CDV3Q9UKY7 258 aaKnown RBP19.02■□□□□ 0.64
PCF11-206ENST00000533018 SLC8A2Q9UPR5 921 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 WNT6Q9Y6F9 365 aa19.02■□□□□ 0.64
PCF11-206ENST00000533018 A8MXQ7 604 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 PRR5-ARHGAP8B1AHC4 643 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 TRDMT1O14717 391 aaKnown RBP19.01■□□□□ 0.63
PCF11-206ENST00000533018 ABL1P00519 1130 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 EGFP01133 1207 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 RETP07949 1114 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 HOXC13P31276 330 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 PXNP49023 591 aaPredicted RBP19.01■□□□□ 0.63
PCF11-206ENST00000533018 GALK1P51570 392 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 ARHGAP8P85298 464 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 DNM1Q05193 864 aaKnown RBP19.01■□□□□ 0.63
PCF11-206ENST00000533018 EHHADHQ08426 723 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 PKP1Q13835 747 aa19.01■□□□□ 0.63
PCF11-206ENST00000533018 KNOP1Q1ED39 458 aaKnown RBP19.01■□□□□ 0.63
PCF11-206ENST00000533018 ATL3Q6DD88 541 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms