RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
UBXN1-213ENST00000532904 ADGRA2Q96PE1 1338 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 CCL15-CCL14A0A0B4J2E2 113 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 A0A1W2PPM1 405 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 RBM47A0AV96 593 aaKnown RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 SMNDC1O75940 238 aaKnown RBP eCLIP18.87■□□□□ 0.613e-7■□□□□ 8.2
UBXN1-213ENST00000532904 LUC7L3O95232 432 aaKnown RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 MMP8P22894 467 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 RASSF2P50749 326 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 NLRP11P59045 1033 aaKnown RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 RPL7AP62424 266 aaKnown RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 CCL15Q16663 113 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 HP1BP3Q5SSJ5 553 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 ZBED8Q8IZ13 594 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF75CPQ92670 426 aaPredicted RBP18.87■□□□□ 0.61
UBXN1-213ENST00000532904 TBC1D10AQ9BXI6 508 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 PCDH9Q9HC56 1237 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 FETUBQ9UGM5 382 aa18.87■□□□□ 0.61
UBXN1-213ENST00000532904 hCG_1818297A0A087WSY0 165 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 HBP1O60381 514 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZWINTO95229 277 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ITGAVP06756 1048 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 TBXAS1P24557 533 aaPredicted RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF252P-AS1Q0IIN9 211 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 PDIA2Q13087 525 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 BLMHQ13867 455 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 TAF11Q15544 211 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 SLC45A4Q5BKX6 768 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZC3H12AQ5D1E8 599 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 WASHC2DQ5SRD0 308 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 OTOAQ7RTW8 1153 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 LONP2Q86WA8 852 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF398Q8TD17 642 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 KCNV2Q8TDN2 545 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 SH3TC2Q8TF17 1288 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 STK32AQ8WU08 396 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 MAK16Q9BXY0 300 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF408Q9H9D4 720 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 RPL26L1Q9UNX3 145 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 LRRC42Q9Y546 428 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 IVNS1ABPQ9Y6Y0 642 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 C2CD2LO14523 706 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 NEBLO76041 1014 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 LAMC2Q13753 1193 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 WDR72Q3MJ13 1102 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ZFYVE27Q5T4F4 411 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 LVRNQ6Q4G3 990 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 ENDOVQ8N8Q3 282 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 BRI3BPQ8WY22 251 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 NAF1Q96HR8 494 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 TARS2Q9BW92 718 aaKnown RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 HAPLN2Q9GZV7 340 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 C2orf40Q9H1Z8 148 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 TLE6Q9H808 572 aa18.86■□□□□ 0.61
UBXN1-213ENST00000532904 GBA2Q9HCG7 927 aaPredicted RBP18.86■□□□□ 0.61
UBXN1-213ENST00000532904 TCRBV5S1A1TA0A578 114 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 TPBGLP0DKB5 382 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 FGFR1P11362 822 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 ADORA2AP29274 412 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 ACOT2P49753 483 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 GEMIN4P57678 1058 aaKnown RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 GPX6P59796 221 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 LAMTOR4Q0VGL1 99 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 CAPN12Q6ZSI9 719 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 EMID1Q96A84 441 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 MSTO1Q9BUK6 570 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 PHACTR1Q9C0D0 580 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 SAR1AQ9NR31 198 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 CORO1CQ9ULV4 474 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 MSCO60682 206 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 GM2AP17900 193 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 TFDP3Q5H9I0 405 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 TAPT1Q6NXT6 567 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF449Q6P9G9 518 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 TRIM50Q86XT4 487 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 ZBTB8OSQ8IWT0 167 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 MRPL4Q9BYD3 311 aaKnown RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 PDGFCQ9NRA1 345 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 DDX56Q9NY93 547 aaKnown RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 LNPEPQ9UIQ6 1025 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 FARP1Q9Y4F1 1045 aaPredicted RBP18.85■□□□□ 0.61
UBXN1-213ENST00000532904 NUB1Q9Y5A7 615 aa18.85■□□□□ 0.61
UBXN1-213ENST00000532904 HNRNPCL1O60812 293 aaKnown RBP18.84■□□□□ 0.61
UBXN1-213ENST00000532904 CBX6O95503 412 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 CALB1P05937 261 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 KRT4P19013 534 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 MARK3P27448 753 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 PTPN4P29074 926 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 EPHB2P29323 1055 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 CDKN2BP42772 138 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 ZNF132P52740 706 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 NOP14P78316 857 aaKnown RBP18.84■□□□□ 0.61
UBXN1-213ENST00000532904 ARHGAP1Q07960 439 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 GRM1Q13255 1194 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 TAF1BQ53T94 588 aaPredicted RBP18.84■□□□□ 0.61
UBXN1-213ENST00000532904 CMPK2Q5EBM0 449 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 MAMDC4Q6UXC1 1216 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 NLRP9Q7RTR0 991 aa18.84■□□□□ 0.61
UBXN1-213ENST00000532904 PCGF5Q86SE9 256 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms