RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 SHC3Q92529 594 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ZNF669Q96BR6 464 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ASB7Q9H672 318 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 DNAJC18Q9H819 358 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 NDE1Q9NXR1 346 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 CYP39A1Q9NYL5 469 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 CCDC78A2IDD5 438 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 MROH9Q5TGP6 573 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 GLB1LQ6UWU2 654 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 PLEKHH3Q7Z736 793 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 SHOC2Q9UQ13 582 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 EPHB2P29323 1055 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 USP10Q14694 798 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 E2F7Q96AV8 911 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 FGFBP2Q9BYJ0 223 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 TRIM4Q9C037 500 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 MRPL40Q9NQ50 206 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 DDIT4Q9NX09 232 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 THEGQ9P2T0 379 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 GNGT2O14610 69 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 DDNO94850 711 aaPredicted RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 FDFT1P37268 417 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 PTGER2P43116 358 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 NSUN2Q08J23 767 aaKnown RBP eCLIP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 FRA10AC1Q70Z53 315 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 CCDC124Q96CT7 223 aaKnown RBP15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 OPTNQ96CV9 577 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ZFYVE28Q9HCC9 887 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 ACP6Q9NPH0 428 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 GPATCH2LQ9NWQ4 482 aa15.95■□□□□ 0.14
PCDHA3-202ENST00000532566 UBA6A0AVT1 1052 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 CSPG5O95196 566 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 UBA1P22314 1058 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 TNFRSF8P28908 595 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 RGS9BPQ6ZS82 235 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 MSL3Q8N5Y2 521 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 SLC40A1Q9NP59 571 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 SLC24A2Q9UI40 661 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ATP9AO75110 1047 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 HIC1Q14526 733 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 KIF2BQ8N4N8 673 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 TRAPPC12Q8WVT3 735 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 PTPRN2Q92932 1015 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 INPP4AQ96PE3 977 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 HAUS8Q9BT25 410 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 TRPV6Q9H1D0 765 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ITGA11Q9UKX5 1188 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 BARX2Q9UMQ3 279 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 SLC8A2Q9UPR5 921 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 NCANO14594 1321 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 PLIN4Q96Q06 1357 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 C17orf102A2RUQ5 167 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 NFKBIAP25963 317 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 SERPINB4P48594 390 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ZNF268Q14587 947 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ITIH4Q14624 930 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 MFSD7Q6UXD7 560 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 RMDN1Q96DB5 314 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 F8W8V4 182 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 TADA2AO75478 443 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ACO1P21399 889 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 C9orf131Q5VYM1 1079 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 CATSPERGQ6ZRH7 1159 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 ST13P4Q8IZP2 240 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 PABPC5Q96DU9 382 aaKnown RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 MAGEB18Q96M61 343 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 FAM111AQ96PZ2 611 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 C20orf96Q9NUD7 363 aaPredicted RBP15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 PHTF1Q9UMS5 762 aa15.94■□□□□ 0.14
PCDHA3-202ENST00000532566 GSTA4O15217 222 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 GRIN3BO60391 1043 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 SETSIPP0DME0 302 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 ESRRGP62508 458 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 CUL3Q13618 768 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 NAPEPLDQ6IQ20 393 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 ARMC2Q8NEN0 867 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 TMEM134Q9H6X4 195 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 CATSPERBQ9H7T0 1116 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 MYBL2P10244 700 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 EIF4BP23588 611 aaKnown RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 EPHX2P34913 555 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 DNAL1Q4LDG9 190 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 LONP2Q86WA8 852 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 SLC26A7Q8TE54 656 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 PPP1R2P1Q96PQ5 205 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 PAFAH2Q99487 392 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 TRIM15Q9C019 465 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 DRC3Q9H069 523 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 SUDS3Q9H7L9 328 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 SARS2Q9NP81 518 aaKnown RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 ADA2Q9NZK5 511 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 E5RI56 91 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 DNALI1O14645 258 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 AP1G2O75843 785 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 CELF2O95319 508 aaKnown RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 LYPLA2O95372 231 aa15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 RECQLP46063 649 aaPredicted RBP15.93■□□□□ 0.14
PCDHA3-202ENST00000532566 EFTUD2Q15029 972 aaKnown RBP eCLIP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms