RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 UNC93B1Q9H1C4 597 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 SYNDIG1Q9H7V2 258 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 BOLA3Q53S33 107 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 OLFML2BQ68BL8 750 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 SLC24A5Q71RS6 500 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ZBED8Q8IZ13 594 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PPM1NQ8N819 430 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 DBF4BQ8NFT6 615 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 KAT5Q92993 513 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 CHMP6Q96FZ7 201 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PACSIN1Q9BY11 444 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ELOVL4Q9GZR5 314 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 HACD3Q9P035 362 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 RASGRF2O14827 1237 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 LYPLA2O95372 231 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 TROVE2P10155 538 aaKnown RBP eCLIP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 CDKAL1Q5VV42 579 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ATXN7L3BQ96GX2 97 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 SMARCAL1Q9NZC9 954 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 MAFBQ9Y5Q3 323 aaPredicted RBP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 WDR91A4D1P6 747 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 SPTLC1O15269 473 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 MICAL2O94851 1124 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 CXCL14O95715 111 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PPIGQ13427 754 aaKnown RBP eCLIP16.43■□□□□ 0.224e-6■■□□□ 12.9
PPFIA1-222ENST00000532504 ARHGEF7Q14155 803 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 GRB14Q14449 540 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 GIT1Q9Y2X7 761 aa16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.43■□□□□ 0.22
PPFIA1-222ENST00000532504 RABGAP1LQ5R372 815 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 TTC19Q6DKK2 380 aaPredicted RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 IPMKQ8NFU5 416 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 UBE2OQ9C0C9 1292 aaKnown RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 BCAS3Q9H6U6 928 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 VPS28Q9UK41 221 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 ASTN1O14525 1302 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 F9P00740 461 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 USP17L7P0C7H9 530 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 PDK1Q15118 436 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 UCMAQ8WVF2 138 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF536O15090 1300 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 RNF40O75150 1001 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 PTPN1P18031 435 aaKnown RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 FRA10AC1Q70Z53 315 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF571Q7Z3V5 609 aaPredicted RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 SH3RF1Q7Z6J0 888 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 GSPT2Q8IYD1 628 aaKnown RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 LRRC43Q8N309 656 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 CDC26Q8NHZ8 85 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 LRRC8CQ8TDW0 803 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 C18orf25Q96B23 403 aaPredicted RBP16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 PCDHB8Q9UN66 801 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 CASZ1Q86V15 1759 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 GPC4O75487 556 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 RBP3P10745 1247 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 LDLRAD1Q5T700 205 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 CHST12Q9NRB3 414 aa16.42■□□□□ 0.22
PPFIA1-222ENST00000532504 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 DNAJC6O75061 913 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 NDUFV1P49821 464 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 KPNA1P52294 538 aaPredicted RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 DRP2Q13474 957 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 TMEM86AQ8N2M4 240 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 VPS11Q9H270 941 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 CLK2P49760 499 aaKnown RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 CCZ1BP86790 482 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 CUL1Q13616 776 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF697Q5TEC3 545 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 ATL2Q8NHH9 583 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 OGFRQ9NZT2 677 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 KLRC4O43908 158 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 GRM5P41594 1212 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 NCKAP1LP55160 1127 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 GRIK3Q13003 919 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 PSMD5Q16401 504 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 TAF1BQ53T94 588 aaPredicted RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 KLC3Q6P597 504 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 CINPQ9BW66 212 aaPredicted RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 GTPBP10A4D1E9 387 aaKnown RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 MAPK13O15264 365 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 KPNA2P52292 529 aaKnown RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 POU5F1BQ06416 359 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 ARHGAP1Q07960 439 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 GKAP1Q5VSY0 366 aaPredicted RBP16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 UROC1Q96N76 676 aa16.41■□□□□ 0.22
PPFIA1-222ENST00000532504 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms