RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 THAP2Q9H0W7 228 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SLC30A1Q9Y6M5 507 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 RGPD5Q99666 1765 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 CST8O60676 142 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 F9P00740 461 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 CLTBP09497 229 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 BRCC3P46736 316 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 CASP5P51878 434 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 EPHB4P54760 987 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 OXCT1P55809 520 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 RBBP5Q15291 538 aaKnown RBP8.32□□□□□ -1.08
CTNND1-230ENST00000532245 CLEC17AQ6ZS10 378 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SLFN11Q7Z7L1 901 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 ZBED8Q8IZ13 594 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 PPM1NQ8N819 430 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SPATA18Q8TC71 538 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SCG3Q8WXD2 468 aaKnown RBP8.32□□□□□ -1.08
CTNND1-230ENST00000532245 GOLPH3Q9H4A6 298 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 SMYD3Q9H7B4 428 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 GIT1Q9Y2X7 761 aa8.32□□□□□ -1.08
CTNND1-230ENST00000532245 LZTS3O60299 673 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 RTN3O95197 1032 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 SETSIPP0DME0 302 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TBX4P57082 545 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 MYRIPQ8NFW9 859 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 APBB2Q92870 758 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 SPG21Q9NZD8 308 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 LRRC37A3O60309 1634 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 IQANK1A0A1B0GTG1 560 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 PHF20L1A8MW92 1017 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 IGF2BP3O00425 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GRIK3Q13003 919 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 PCBP1Q15365 356 aaKnown RBP eCLIP8.31□□□□□ -1.084e-9■■■□□ 19
CTNND1-230ENST00000532245 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TMEM86AQ8N2M4 240 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 DBF4BQ8NFT6 615 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TTC8Q8TAM2 541 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 CDK5RAP1Q96SZ6 601 aaKnown RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 HSD17B14Q9BPX1 270 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 RRAGDQ9NQL2 400 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 RAB6BQ9NRW1 208 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 COL1A2P08123 1366 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 C4BP0C0L5 1744 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM66O15016 1216 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 ESRRBO95718 433 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GYPCP04921 128 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 PLEKP08567 350 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 SPATA31C1P0DKV0 1188 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 LAG3P18627 525 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 MYBPC2Q14324 1141 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 UNC45BQ8IWX7 931 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 SCUBE3Q8IX30 993 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF784Q8NCA9 323 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 SLC20A1Q8WUM9 679 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 XPO6Q96QU8 1125 aaKnown RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 ERGIC2Q96RQ1 377 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 ARHGAP39Q9C0H5 1083 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 LGR5O75473 907 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 MICAL2O94851 1124 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GLUD1P00367 558 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 OR1D2P34982 312 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 CREMQ03060 361 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 IZUMO3Q5VZ72 239 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TFAP2DQ7Z6R9 452 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 ARHGEF19Q8IW93 802 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 HS6ST3Q8IZP7 471 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 MCUR1Q96AQ8 359 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 GOLGA2P5Q9HBQ8 144 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM10Q9UDY6 481 aa8.31□□□□□ -1.08
CTNND1-230ENST00000532245 G3BP2Q9UN86 482 aaKnown RBP8.31□□□□□ -1.08
CTNND1-230ENST00000532245 PMPCBO75439 489 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 KRT37O76014 449 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PTPN1P18031 435 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 CHRNA3P32297 505 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 BOLA3Q53S33 107 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 HABP4Q5JVS0 413 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 DCLRE1AQ6PJP8 1040 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 CEP120Q8N960 986 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 CFAP61Q8NHU2 1237 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 DDX23Q9BUQ8 820 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ARVCFO00192 962 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 RASGRF2O14827 1237 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 NVLO15381 856 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PCDH8O95206 1070 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ATP1A1P05023 1023 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TMEM253P0C7T8 217 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 FGFR1P11362 822 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TAC1P20366 129 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 DLG4P78352 724 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 MTM1Q13496 603 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 MMEL1Q495T6 779 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 SPATA17Q96L03 361 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TRAF3IP3Q9Y228 551 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms