RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CDCA3Q99618 268 aaPredicted RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 ABCB6Q9NP58 842 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
COPB1-208ENST00000532088 AFF4Q9UHB7 1163 aaKnown RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
COPB1-208ENST00000532088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.28□□□□□ -0.28
COPB1-208ENST00000532088 EPOPA6NHQ4 379 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 RNF225M0QZC1 329 aaPredicted RBP13.28□□□□□ -0.28
COPB1-208ENST00000532088 MED7O43513 233 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 ABLIM3O94929 683 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 GNA15P30679 374 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 RPIAP49247 311 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 GSDMDP57764 484 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 CDK17Q00537 523 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 CNGA2Q16280 664 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 CFAP221Q4G0U5 840 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 PRSS55Q6UWB4 352 aaPredicted RBP13.28□□□□□ -0.28
COPB1-208ENST00000532088 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 ZNF461Q8TAF7 563 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 GDPD5Q8WTR4 605 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 HDAC7Q8WUI4 952 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 CEP295NLQ96MC4 621 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 HNRNPABQ99729 332 aaKnown RBP13.28□□□□□ -0.28
COPB1-208ENST00000532088 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
COPB1-208ENST00000532088 CERS4Q9HA82 394 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 CDY1Q9Y6F8 540 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
COPB1-208ENST00000532088 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 C2CD2LO14523 706 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 TEX28O15482 410 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 CYP26A1O43174 497 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 CNPP09543 421 aaKnown RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 CPB1P15086 417 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 ANXA13P27216 316 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 OR1D2P34982 312 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 IRS1P35568 1242 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 USP8P40818 1118 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 MAGEA11P43364 429 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 PDE6CP51160 858 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 ROR1Q01973 937 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 ASIC2Q16515 512 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 SGO2Q562F6 1265 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 HABP4Q5JVS0 413 aaKnown RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 LCLAT1Q6UWP7 414 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 VSTM1Q6UX27 236 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 MICAL1Q8TDZ2 1067 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 CYFIP2Q96F07 1278 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 PDLIM2Q96JY6 352 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.29
COPB1-208ENST00000532088 PANX2Q96RD6 677 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 CRTAC1Q9NQ79 661 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 DPP7Q9UHL4 492 aa13.27□□□□□ -0.29
COPB1-208ENST00000532088 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 MYBPHLA2RUH7 354 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 MTMR11A4FU01 709 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 HIDE1A8MVS5 230 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 O00370 1275 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 ZBTB24O43167 697 aaPredicted RBP13.26□□□□□ -0.29
COPB1-208ENST00000532088 HCRTO43612 131 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 GFPT2O94808 682 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 SERPING1P05155 500 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 ATF2P15336 505 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 CYP11B1P15538 503 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 PSMC1P62191 440 aaKnown RBP13.26□□□□□ -0.29
COPB1-208ENST00000532088 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 LILRA6Q6PI73 481 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 LIAT1Q6ZQX7 453 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 LRRTM3Q86VH5 581 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 SLC47A2Q86VL8 602 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 TC2NQ8N9U0 490 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 CPLX3Q8WVH0 158 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 ZNF606Q8WXB4 792 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 AUTS2Q8WXX7 1259 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 DDX1Q92499 740 aaKnown RBP13.26□□□□□ -0.29
COPB1-208ENST00000532088 MYLPFQ96A32 169 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 PCED1BQ96HM7 432 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 TMEM209Q96SK2 561 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 NSUN3Q9H649 340 aaKnown RBP13.26□□□□□ -0.29
COPB1-208ENST00000532088 PNPLA8Q9NP80 782 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
COPB1-208ENST00000532088 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.26□□□□□ -0.29
COPB1-208ENST00000532088 PCDHB5Q9Y5E4 795 aa13.26□□□□□ -0.29
COPB1-208ENST00000532088 ADAM12O43184 909 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 CLASP2O75122 1294 aaKnown RBP13.25□□□□□ -0.29
COPB1-208ENST00000532088 ATP2C2O75185 946 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 PAPLNO95428 1278 aa13.25□□□□□ -0.29
COPB1-208ENST00000532088 PNMA6AP0CW24 399 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms