RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 MIS12Q9H081 205 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 AVENQ9NQS1 362 aaPredicted RBP12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 TRIM10Q9UDY6 481 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 CYTH4Q9UIA0 394 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 BACE2Q9Y5Z0 518 aa12.7□□□□□ -0.38
UBASH3B-207ENST00000530917 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 CLDN5O00501 218 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 FAM200BP0CF97 657 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 BMPR1AP36894 532 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 RPL34P49207 117 aaKnown RBP12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SLC8A3P57103 927 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SNX16P57768 344 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 DSG1Q02413 1049 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SMARCB1Q12824 385 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 PDCLQ13371 301 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 PTPN20Q4JDL3 420 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 PMF1Q6P1K2 205 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 C4orf50Q6ZRC1 276 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 MMS22LQ6ZRQ5 1243 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 TMEM110Q86TL2 294 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 RHOT2Q8IXI1 618 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SLC35G2Q8TBE7 412 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 RIN2Q8WYP3 895 aaPredicted RBP12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 MYLPFQ96A32 169 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 ZNF653Q96CK0 615 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 C18orf8Q96DM3 657 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 ARHGEF26Q96DR7 871 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SMARCD1Q96GM5 515 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 C11orf70Q9BRQ4 267 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 PLVAPQ9BX97 442 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 TMLHEQ9NVH6 421 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 UVRAGQ9P2Y5 699 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 MTRRQ9UBK8 725 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 CNOT8Q9UFF9 292 aaKnown RBP12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 STRIP2Q9ULQ0 834 aa12.69□□□□□ -0.38
UBASH3B-207ENST00000530917 KIF2AO00139 706 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 TULP2O00295 520 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 KIF5CO60282 957 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 AP1G2O75843 785 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 FGF18O76093 207 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 MTA2O94776 668 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 NPR3P17342 541 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 RRM1P23921 792 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 ACADSBP45954 432 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 NOP2P46087 812 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 RABGGTBP53611 331 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 HADHBP55084 474 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 GSCP56915 257 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 GPR17Q13304 367 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 ZNF268Q14587 947 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 SLC39A12Q504Y0 691 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 PLEKHA7Q6IQ23 1121 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 CLEC20AQ6ZU45 233 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 FAM35AQ86V20 835 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 KLHL23Q8NBE8 558 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 KCTD13Q8WZ19 329 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 CPXM1Q96SM3 734 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 CSNK1G1Q9HCP0 422 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 MRPL47Q9HD33 250 aaKnown RBP12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 WDR35Q9P2L0 1181 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
UBASH3B-207ENST00000530917 TCRBV5S1A1TA0A578 114 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 FAM170AA1A519 330 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 MACROD2A1Z1Q3 448 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 ERBB2P04626 1255 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 RB1P06400 928 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 OR4Q2P0C623 313 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 BDNFP23560 247 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 GLUD2P49448 558 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 ETF1P62495 437 aaKnown RBP12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 PSMD5Q16401 504 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 CFAP221Q4G0U5 840 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 SLC8B1Q6J4K2 584 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 PRSS55Q6UWB4 352 aaPredicted RBP12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 RSPO2Q6UXX9 243 aaPredicted RBP12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 VPS52Q8N1B4 723 aa12.67□□□□□ -0.38
UBASH3B-207ENST00000530917 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms