RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 CHD8Q9HCK8 2581 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 C2orf78A6NCI8 922 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 GCNT3O95395 438 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 CKMP06732 381 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 KRT19P08727 400 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 HDCP19113 662 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 KCNA4P22459 653 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 IFNAR2P48551 515 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 CASP5P51878 434 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 USP4Q13107 963 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 NR1H3Q13133 447 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 ALCAMQ13740 583 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 ELF2Q15723 593 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 LIMS2Q7Z4I7 341 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 ADGRF2Q8IZF7 708 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 SYCP3Q8IZU3 236 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 ACDQ96AP0 544 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 LINC00597Q9H2U6 94 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 SMOC1Q9H4F8 434 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
CAPN1-219ENST00000530495 HELZP42694 1942 aaKnown RBP16■□□□□ 0.15
CAPN1-219ENST00000530495 FRMD3A2A2Y4 597 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 BCLAF3A2AJT9 711 aaKnown RBP15.99■□□□□ 0.15
CAPN1-219ENST00000530495 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 DCLK1O15075 740 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 HCRTO43612 131 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 CCDC142Q17RM4 750 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 SCN4BQ8IWT1 228 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 SH3RF2Q8TEC5 729 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 FAM84AQ96KN4 292 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 SPATA17Q96L03 361 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 CEP295NLQ96MC4 621 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 CBWD1Q9BRT8 395 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 ARHGAP26Q9UNA1 814 aa15.99■□□□□ 0.15
CAPN1-219ENST00000530495 CNOT1A5YKK6 2376 aaKnown RBP15.99■□□□□ 0.15
CAPN1-219ENST00000530495 ATP2C2O75185 946 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 KCNK5O95279 499 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 CAVIN2O95810 425 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 IDEP14735 1019 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 PFKLP17858 780 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 LMO2P25791 158 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 PDE6CP51160 858 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 CREB5Q02930 508 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 MYO1EQ12965 1108 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 PSMD2Q13200 908 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 KCNB1Q14721 858 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 RNF43Q68DV7 783 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 VSTM1Q6UX27 236 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 C4orf50Q6ZRC1 276 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 GPD1LQ8N335 351 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 TTC16Q8NEE8 873 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 KBTBD7Q8WVZ9 684 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 CLIC6Q96NY7 704 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 MTMR12Q9C0I1 747 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 PANK4Q9NVE7 773 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 INTS13Q9NVM9 706 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 MAGEC2Q9UBF1 373 aaPredicted RBP15.98■□□□□ 0.15
CAPN1-219ENST00000530495 CDH9Q9ULB4 789 aa15.98■□□□□ 0.15
CAPN1-219ENST00000530495 NUP205Q92621 2012 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 LAMA1P25391 3075 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 K7EQS6 105 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 KIAA0391O15091 583 aaKnown RBP15.97■□□□□ 0.15
CAPN1-219ENST00000530495 NFATC1O95644 943 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 TMEM191BP0C7N4 346 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 TXLNAP40222 546 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 OPRD1P41143 372 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 DGKEP52429 567 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 ZXDBP98169 803 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 MAPRE1Q15691 268 aaKnown RBP15.97■□□□□ 0.15
CAPN1-219ENST00000530495 TCEAL6Q6IPX3 200 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 CCDC73Q6ZRK6 1079 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 KIAA1958Q8N8K9 716 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 USP33Q8TEY7 942 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 TCEAL3Q969E4 200 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 HPDLQ96IR7 371 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 ANKRD36BP1Q96IX9 119 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 SYT15Q9BQS2 421 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 FGFBP2Q9BYJ0 223 aa15.97■□□□□ 0.15
CAPN1-219ENST00000530495 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
CAPN1-219ENST00000530495 PTPRDP23468 1912 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 USP24Q9UPU5 2620 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 VPS37CA5D8V6 355 aaPredicted RBP15.96■□□□□ 0.15
CAPN1-219ENST00000530495 PRPF6O94906 941 aaKnown RBP15.96■□□□□ 0.15
CAPN1-219ENST00000530495 BDNFP23560 247 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 GRIK1P39086 918 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 SURF1Q15526 300 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 DUOXA2Q1HG44 320 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 GAB4Q2WGN9 574 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 USP39Q53GS9 565 aaKnown RBP15.96■□□□□ 0.15
CAPN1-219ENST00000530495 C11orf74Q86VG3 221 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 RASSF3Q86WH2 238 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 ADGRG2Q8IZP9 1017 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 TSTD1Q8NFU3 115 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 OR5B17Q8NGF7 314 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 NOC3LQ8WTT2 800 aaKnown RBP15.96■□□□□ 0.15
CAPN1-219ENST00000530495 PANK2Q9BZ23 570 aa15.96■□□□□ 0.15
CAPN1-219ENST00000530495 CRTAC1Q9NQ79 661 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms