RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CEP192Q8TEP8 1941 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 TRAV19A0A0A6YYK7 116 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 SLC30A4O14863 429 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 TNNC2P02585 160 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 PDGFRBP09619 1106 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 BDNFP23560 247 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 HOXD13P35453 343 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 MYO1EQ12965 1108 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 USP4Q13107 963 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 PDGFRLQ15198 375 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 CFAP221Q4G0U5 840 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 FAM171BQ6P995 826 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 KBTBD6Q86V97 674 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 RDH13Q8NBN7 331 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 GAB3Q8WWW8 586 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 EZH1Q92800 747 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 CRTAC1Q9NQ79 661 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 HSPBP1Q9NZL4 362 aa22.21■■□□□ 1.15
TSPAN4-219ENST00000530404 ZNF233A6NK53 670 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 SOBPA7XYQ1 873 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 RPP40O75818 363 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 USP17L7P0C7H9 530 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 CCDC192P0DO97 292 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 KCNA4P22459 653 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 IFNAR2P48551 515 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 NASPP49321 788 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 SF3A2Q15428 464 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 CPA6Q8N4T0 437 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 RPLP0P6Q8NHW5 317 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 SPATA18Q8TC71 538 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 OSCP1Q8WVF1 389 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 DHX58Q96C10 678 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 FUBP3Q96I24 572 aaKnown RBP eCLIP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 P2RY13Q9BPV8 354 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 GCNT4Q9P109 453 aa22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 TFIP11Q9UBB9 837 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 MAGEC2Q9UBF1 373 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 MORC2Q9Y6X9 1032 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-219ENST00000530404 ACACBO00763 2458 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 STX6O43752 255 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 ATG13O75143 517 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 USP46P62068 366 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 ASIC1P78348 528 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 CYP27A1Q02318 531 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 PSMD2Q13200 908 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 E2F4Q16254 413 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 EML3Q32P44 896 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 PPM1JQ5JR12 505 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 C4orf50Q6ZRC1 276 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 LINC00301Q8NCQ3 95 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 SH3RF2Q8TEC5 729 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 MMS19Q96T76 1030 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 TRIM9Q9C026 710 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 TNMDQ9H2S6 317 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 LINC00597Q9H2U6 94 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 SMOC1Q9H4F8 434 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 ZSCAN16Q9H4T2 348 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 CDH9Q9ULB4 789 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 NME7Q9Y5B8 376 aa22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 MAP1BP46821 2468 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-219ENST00000530404 KIAA0391O15091 583 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 CLIC2O15247 247 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 DRD1P21728 446 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 GRIK1P39086 918 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 MAGEA11P43364 429 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 AMPD2Q01433 879 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 KCNB1Q14721 858 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 DUOXA2Q1HG44 320 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 AASDHQ4L235 1098 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 STXBP4Q6ZWJ1 553 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 CACNA2D4Q7Z3S7 1137 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 LIMS2Q7Z4I7 341 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 FSIP1Q8NA03 581 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 CD101Q93033 1021 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 INTS4Q96HW7 963 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 MRPL45Q9BRJ2 306 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 RXFP3Q9NSD7 469 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 KBTBD4Q9NVX7 518 aa22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 KMT2BQ9UMN6 2715 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-219ENST00000530404 EPG5Q9HCE0 2579 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 ANTXRLA6NF34 631 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 SPTLC2O15270 562 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 CST3P01034 146 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 DLATP10515 647 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 HDCP19113 662 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 WARSP23381 471 aaKnown RBP22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 CASP1P29466 404 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 ZXDBP98169 803 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 SURF1Q15526 300 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 MDH1BQ5I0G3 518 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 FOXD4L5Q5VV16 416 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 DPH6Q7L8W6 267 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 TRAPPC11Q7Z392 1133 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 WDR49Q8IV35 697 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 NELFCDQ8IXH7 590 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 FOXD4L4Q8WXT5 416 aaPredicted RBP22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 ATP2A3Q93084 1043 aa22.17■■□□□ 1.14
TSPAN4-219ENST00000530404 CHD8Q9HCK8 2581 aa22.16■■□□□ 1.14
TSPAN4-219ENST00000530404 EPN2O95208 641 aa22.16■■□□□ 1.14
TSPAN4-219ENST00000530404 RAP1GAPP47736 663 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms