RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MED16Q9Y2X0 877 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 SNX13Q9Y5W8 968 aa5.57□□□□□ -1.52
C11orf88-204ENST00000529661 SPATA31A6Q5VVP1 1343 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 F8W8V4 182 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 PROM1O43490 865 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 TRIAP1O43715 76 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 FGF18O76093 207 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 RARRES1P49788 294 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 HNRNPMP52272 730 aaKnown RBP eCLIP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 SOX8P57073 446 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 ITIH3Q06033 890 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 ZRSR2Q15696 482 aaKnown RBP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 RBM20Q5T481 1227 aaKnown RBP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 RD3Q7Z3Z2 195 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 PEG10Q86TG7 708 aaKnown RBP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 RNF152Q8N8N0 203 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 FAM46DQ8NEK8 389 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 PDLIM2Q96JY6 352 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 P2RX7Q99572 595 aaKnown RBP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 WDR12Q9GZL7 423 aaKnown RBP5.56□□□□□ -1.52
C11orf88-204ENST00000529661 R3HDMLQ9H3Y0 253 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 PRDM13Q9H4Q3 707 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 COL20A1Q9P218 1284 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 RAD54BQ9Y620 910 aa5.56□□□□□ -1.52
C11orf88-204ENST00000529661 ADM5C9JUS6 153 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 MPPED1O15442 326 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 CREB3O43889 395 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 ORC4O43929 436 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 TCEA3O75764 348 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 THP07101 528 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 RHOP08100 348 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 PIM1P11309 404 aaPredicted RBP5.55□□□□□ -1.52
C11orf88-204ENST00000529661 BRAFP15056 766 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 STT3AP46977 705 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 MAPK10P53779 464 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 STK3Q13188 491 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 DAG1Q14118 895 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 FAM160B1Q5W0V3 765 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 FBXO42Q6P3S6 717 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 PPP1R32Q7Z5V6 425 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
C11orf88-204ENST00000529661 TTYH3Q9C0H2 523 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 SMURF2Q9HAU4 748 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 ALG13Q9NP73 1137 aaKnown RBP5.55□□□□□ -1.52
C11orf88-204ENST00000529661 IL17RBQ9NRM6 502 aa5.55□□□□□ -1.52
C11orf88-204ENST00000529661 SPATA31A3Q5VYP0 1347 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 POM121BA6NF01 834 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 BTN3A1O00481 513 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 NCK2O43639 380 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 UNC5CO95185 931 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 TSHRP16473 764 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 CD6P30203 668 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 GCLCP48506 637 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 TOB1P50616 345 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 HTRA4P83105 476 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 TCF15Q12870 199 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 TXNRD1Q16881 649 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 NBPF8Q3BBV2 869 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 INO80DQ53TQ3 878 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 ZNF362Q5T0B9 420 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 AKNAD1Q5T1N1 836 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 KIAA0895LQ68EN5 471 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 HIBCHQ6NVY1 386 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 DPY19L2P1Q6NXN4 242 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 ARHGEF25Q86VW2 580 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 PRIMA1Q86XR5 153 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 VPS37AQ8NEZ2 397 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 OR6B3Q8NGW1 331 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 SLC46A1Q96NT5 459 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 ACTRT3Q9BYD9 372 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 PPCSQ9HAB8 311 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 ARFGAP3Q9NP61 516 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 PNPLA8Q9NP80 782 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 PTGFRNQ9P2B2 879 aa5.54□□□□□ -1.52
C11orf88-204ENST00000529661 AFF4Q9UHB7 1163 aaKnown RBP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
C11orf88-204ENST00000529661 TTBK1Q5TCY1 1321 aaPredicted RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 CCDC151A5D8V7 595 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 F5H423 210 aaPredicted RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 SOAT2O75908 522 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 DNAJB5O75953 348 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 PARP1P09874 1014 aaKnown RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 PPM1AP35813 382 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 IL6STP40189 918 aaPredicted RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 GRIA3P42263 894 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 TRAPPC10P48553 1259 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 CACNA2D1P54289 1103 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 NXPH1P58417 271 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 BOP1Q14137 746 aaKnown RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 PTPRRQ15256 657 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 C4orf46Q504U0 113 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 C3orf38Q5JPI3 329 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 VPS53Q5VIR6 699 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 TMEM108Q6UXF1 575 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 MICU3Q86XE3 530 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 ATP11CQ8NB49 1132 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 MAML1Q92585 1016 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms