RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RHDQ02161 417 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 SLFN5Q08AF3 891 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 FSTL1Q12841 308 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 KIF22Q14807 665 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 SMN1Q16637 294 aaKnown RBP5.89□□□□□ -1.47
CSDE1-212ENST00000529046 CCSAPQ6IQ19 270 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-212ENST00000529046 MAEAQ7L5Y9 396 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 UBE3BQ7Z3V4 1068 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 MYEOVQ96EZ4 313 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 FAM204AQ9H8W3 233 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 GPR35Q9HC97 309 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 GNL3LQ9NVN8 582 aaKnown RBP5.89□□□□□ -1.47
CSDE1-212ENST00000529046 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 FEZ2Q9UHY8 353 aaPredicted RBP5.89□□□□□ -1.47
CSDE1-212ENST00000529046 DMRT1Q9Y5R6 373 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 HS3ST4Q9Y661 456 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 NCAPD2Q15021 1401 aa5.89□□□□□ -1.47
CSDE1-212ENST00000529046 SMG6Q86US8 1419 aaKnown RBP5.89□□□□□ -1.47
CSDE1-212ENST00000529046 COL24A1Q17RW2 1714 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 OVOL3O00110 214 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 NCR1O76036 304 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 PRSS23O95084 383 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 SPATA31D3P0C874 917 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 SLC6A2P23975 617 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 SMARCA1P28370 1054 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 PIK3CGP48736 1102 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 RAP2BP61225 183 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 FGL2Q14314 439 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 SPATA31D4Q6ZUB0 917 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 FITM2Q8N6M3 262 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 RAPGEF4Q8WZA2 1011 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 TIFAQ96CG3 184 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 MTFMTQ96DP5 389 aaKnown RBP5.88□□□□□ -1.47
CSDE1-212ENST00000529046 SARGQ9BW04 601 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 C22orf23Q9BZE7 217 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 GSTO2Q9H4Y5 243 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 PCDH11XQ9BZA7 1347 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 PCDH11YQ9BZA8 1340 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 FLT4P35916 1363 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 USP47Q96K76 1375 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 QSER1Q2KHR3 1735 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 BTAF1O14981 1849 aa5.88□□□□□ -1.47
CSDE1-212ENST00000529046 CAPN8A6NHC0 703 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 PRC1O43663 620 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 CKBP12277 381 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 TRIM27P14373 513 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 RRS1Q15050 365 aaKnown RBP5.87□□□□□ -1.47
CSDE1-212ENST00000529046 MED25Q71SY5 747 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 DAAM2Q86T65 1068 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 VRK3Q8IV63 474 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 FUBP1Q96AE4 644 aaKnown RBP5.87□□□□□ -1.47
CSDE1-212ENST00000529046 TTC17Q96AE7 1141 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 AGAP2Q99490 1192 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 PACSIN1Q9BY11 444 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 DPH1Q9BZG8 443 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 TFCP2L1Q9NZI6 479 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 MED16Q9Y2X0 877 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 FRMPD2Q68DX3 1309 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-212ENST00000529046 MEGF6O75095 1541 aa5.87□□□□□ -1.47
CSDE1-212ENST00000529046 CENPVL1A0A0U1RR11 272 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 CDHR4A6H8M9 788 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 H3BUI4 141 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 MYO1FO00160 1098 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
CSDE1-212ENST00000529046 LPXNO60711 386 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 MYBP10242 640 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 FAM193AP78312 1265 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 SEMA5AQ13591 1074 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 PPP1R32Q7Z5V6 425 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 FAM156AQ8NDB6 213 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 IL31RAQ8NI17 732 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 SCAMP4Q969E2 229 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 LTV1Q96GA3 475 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-212ENST00000529046 KLHL32Q96NJ5 620 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 ZMAT3Q9HA38 289 aaKnown RBP5.86□□□□□ -1.47
CSDE1-212ENST00000529046 CFAP97Q9P2B7 532 aa5.86□□□□□ -1.47
CSDE1-212ENST00000529046 CCNL1Q9UK58 526 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-212ENST00000529046 LY75O60449 1722 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 MYOM1P52179 1685 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 NSD3Q9BZ95 1437 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 TMEM200CA6NKL6 621 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 E9PLN8 166 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 ZNF185O15231 689 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 CAND2O75155 1236 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 NDUFA10O95299 355 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 RARBP10826 455 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 CACNB3P54284 484 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 NOMO3P69849 1222 aa5.85□□□□□ -1.47
CSDE1-212ENST00000529046 POU6F2P78424 691 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 CNN3Q15417 329 aaKnown RBP5.85□□□□□ -1.47
CSDE1-212ENST00000529046 BEAN1Q3B7T3 259 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms