RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 TCF15Q12870 199 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 ORC1Q13415 861 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 KRT39Q6A163 491 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 ZNF852Q6ZMS4 543 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 ACOT1Q86TX2 421 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 CMTM8Q8IZV2 173 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 DTWD2Q8NBA8 298 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 DNASE1L2Q92874 299 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 ELOVL4Q9GZR5 314 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 DNAI2Q9GZS0 605 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 FAM86C1Q9NVL1 165 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 EHD2Q9NZN4 543 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 NDRG2Q9UN36 371 aaKnown RBP15.22■□□□□ 0.03
CAPN1-216ENST00000528739 MRPS17Q9Y2R5 130 aaKnown RBP15.22■□□□□ 0.03
CAPN1-216ENST00000528739 NME7Q9Y5B8 376 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 NOTCH4Q99466 2003 aa15.22■□□□□ 0.03
CAPN1-216ENST00000528739 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 NCAM2O15394 837 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 LRRN2O75325 713 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 NOL4O94818 638 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 CD58P19256 250 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 PPP1R2P41236 205 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 NDST1P52848 882 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 UBE2HP62256 183 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 NOP14P78316 857 aaKnown RBP15.21■□□□□ 0.03
CAPN1-216ENST00000528739 CAMK4Q16566 473 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 WDR44Q5JSH3 913 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 C1orf220Q5T0J3 134 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 CC2D1AQ6P1N0 951 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-216ENST00000528739 DENND5BQ6ZUT9 1274 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 ADSSL1Q8N142 457 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 CELF5Q8N6W0 485 aaKnown RBP15.21■□□□□ 0.03
CAPN1-216ENST00000528739 PJA1Q8NG27 643 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 BPIFB1Q8TDL5 484 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 TAS1R2Q8TE23 839 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 RSPRY1Q96DX4 576 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 B3GNT5Q9BYG0 378 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 ZNF518BQ9C0D4 1074 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 TRPM5Q9NZQ8 1165 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 ZMYM5Q9UJ78 669 aa15.21■□□□□ 0.03
CAPN1-216ENST00000528739 TRAV19A0A0A6YYK7 116 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 MAN2B1O00754 1011 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 CHADO15335 359 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 PRAMEF12O95522 483 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 ASS1P00966 412 aaKnown RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 CKMP06732 381 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 CCNE1P24864 410 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 GTF2H1P32780 548 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 MXI1P50539 228 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 PMS1P54277 932 aaKnown RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 LRRC63Q05C16 580 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 CCDC40Q4G0X9 1142 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 ARHGAP29Q52LW3 1261 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 ALYREFQ86V81 257 aaKnown RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 MON1AQ86VX9 555 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 ELOA2Q8IYF1 753 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 CCDC105Q8IYK2 499 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 SPATA20Q8TB22 786 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 FAM3CQ92520 227 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 DHTKD1Q96HY7 919 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 SPATA17Q96L03 361 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 LTB4R2Q9NPC1 389 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 TDP1Q9NUW8 608 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 MTF2Q9Y483 593 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-216ENST00000528739 PIAS3Q9Y6X2 628 aa15.2■□□□□ 0.02
CAPN1-216ENST00000528739 SLC16A3O15427 465 aaKnown RBP15.19■□□□□ 0.02
CAPN1-216ENST00000528739 AP1G2O75843 785 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 ADORA2BP29275 332 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 STX17P56962 302 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 ANGPT1Q15389 498 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 COBLL1Q53SF7 1204 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 CREBRFQ8IUR6 639 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-216ENST00000528739 NELFBQ8WX92 580 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 TRMT2BQ96GJ1 504 aaKnown RBP15.19■□□□□ 0.02
CAPN1-216ENST00000528739 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 CYP2S1Q96SQ9 504 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 NELL2Q99435 816 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 NIF3L1Q9GZT8 377 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 FAM49BQ9NUQ9 324 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 SPATA6Q9NWH7 488 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-216ENST00000528739 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 OBP2AQ9NY56 170 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 ARMCX3Q9UH62 379 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-216ENST00000528739 CTNND2Q9UQB3 1225 aa15.19■□□□□ 0.02
CAPN1-216ENST00000528739 NCANO14594 1321 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 BICDL2A1A5D9 508 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 USP17L7P0C7H9 530 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 CCDC130P13994 396 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
CAPN1-216ENST00000528739 HDCP19113 662 aa15.18■□□□□ 0.02
CAPN1-216ENST00000528739 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
CAPN1-216ENST00000528739 ASPAP45381 313 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms