RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 CRELD2Q6UXH1 353 aaPredicted RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 THNSL1Q8IYQ7 743 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 SLC43A3Q8NBI5 491 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 CCDC150Q8NCX0 1101 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 CACTINQ8WUQ7 758 aaKnown RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 TMEM40Q8WWA1 233 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 DHX38Q92620 1227 aaKnown RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 ZNF333Q96JL9 665 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 FAM84AQ96KN4 292 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 ERGIC2Q96RQ1 377 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 LSM14BQ9BX40 385 aaKnown RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 CELF4Q9BZC1 486 aaKnown RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 CDT1Q9H211 546 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 KIAA1586Q9HCI6 787 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 TOPORSQ9NS56 1045 aaPredicted RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 FAM207AQ9NSI2 230 aaPredicted RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 RBAKQ9NYW8 714 aaPredicted RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 OGDHLQ9ULD0 1010 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 PCDHB5Q9Y5E4 795 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.33□□□□□ -1.42e-7■□□□□ 9.6
CKAP5-209ENST00000528593 SNX11Q9Y5W9 270 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 MYH9P35579 1960 aaKnown RBP6.33□□□□□ -1.4
CKAP5-209ENST00000528593 WDR81Q562E7 1941 aa6.33□□□□□ -1.4
CKAP5-209ENST00000528593 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 A0A1B0GUA9 196 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TTC26A0AVF1 554 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PRAMEF27A3QJZ7 478 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 AKR1B15C9JRZ8 316 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 ARVCFO00192 962 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 EPHB6O15197 1021 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 STX10O60499 249 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 B4GALT4O60513 344 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 MFAP3LO75121 409 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SLITRK5O94991 958 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 NPTXRO95502 500 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CHRNA1P02708 482 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TFRCP02786 760 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 GYPCP04921 128 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 RPLP2P05387 115 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 STAG3L1P0CL83 205 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CD8BP10966 210 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 ACTN1P12814 892 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TRIM21P19474 475 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SLC9A1P19634 815 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 FUT4P22083 530 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 HOXA11P31270 313 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 MXI1P50539 228 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 ADKP55263 362 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 OSTNP61366 133 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 APBA1Q02410 837 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PPP3CAQ08209 521 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 NCBP1Q09161 790 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 MGAT3Q09327 533 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 LRMPQ12912 555 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SEPT6Q14141 434 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PSMD6Q15008 389 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 EXOC3L4Q17RC7 722 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TRIM71Q2Q1W2 868 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 DCAF4L1Q3SXM0 396 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CBWD6Q4V339 395 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 HS1BP3Q53T59 392 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CBWD3Q5JTY5 395 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CBWD5Q5RIA9 395 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 LMBRD2Q68DH5 695 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SLC27A1Q6PCB7 646 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 GBP6Q6ZN66 633 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 USP37Q86T82 979 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 RPAINQ86UA6 219 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 BRSK2Q8IWQ3 736 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TMEM192Q8IY95 271 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TC2NQ8N9U0 490 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 NEK11Q8NG66 645 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PARD3BQ8TEW8 1205 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 U2AF1L4Q8WU68 220 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 HRASLS5Q96KN8 279 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 FNBP1Q96RU3 617 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CGRRF1Q99675 332 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 ADPGKQ9BRR6 497 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 NUP58Q9BVL2 599 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SENP6Q9GZR1 1112 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 TMEM117Q9H0C3 514 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PDE11AQ9HCR9 933 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 GCNT4Q9P109 453 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 CPSF3Q9UKF6 684 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PIN4Q9Y237 131 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 NOC2LQ9Y3T9 749 aaKnown RBP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
CKAP5-209ENST00000528593 SIP14410 1827 aa6.32□□□□□ -1.4
CKAP5-209ENST00000528593 PTPRJQ12913 1337 aa6.31□□□□□ -1.4
CKAP5-209ENST00000528593 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
CKAP5-209ENST00000528593 RPS6KA5O75582 802 aa6.31□□□□□ -1.4
CKAP5-209ENST00000528593 NOL4O94818 638 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms