RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
SDHD-205ENST00000528048 RPP25Q9BUL9 199 aaKnown RBP12.9□□□□□ -0.34
SDHD-205ENST00000528048 SRRTQ9BXP5 876 aaKnown RBP12.9□□□□□ -0.34
SDHD-205ENST00000528048 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 NIF3L1Q9GZT8 377 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 TASP1Q9H6P5 420 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 ZNF334Q9HCZ1 680 aaPredicted RBP12.9□□□□□ -0.34
SDHD-205ENST00000528048 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 DACH1Q9UI36 760 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 HCN4Q9Y3Q4 1203 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 MYH11P35749 1972 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 REV3LO60673 3130 aa12.9□□□□□ -0.34
SDHD-205ENST00000528048 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
SDHD-205ENST00000528048 MOSPD3O75425 235 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 DDX6P26196 483 aaKnown RBP eCLIP12.89□□□□□ -0.35
SDHD-205ENST00000528048 NDST1P52848 882 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 GPC5P78333 572 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 DENND5BQ6ZUT9 1274 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 SIX5Q8N196 739 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 CRYBG2Q8N1P7 616 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 FBXL6Q8N531 539 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 SHDQ96IW2 340 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 SPATA17Q96L03 361 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 C8orf48Q96LL4 319 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 ZSWIM3Q96MP5 696 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 ASB16Q96NS5 453 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 TRMT61BQ9BVS5 477 aaKnown RBP12.89□□□□□ -0.35
SDHD-205ENST00000528048 NT5C1AQ9BXI3 368 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 SLC2A4RGQ9NR83 387 aa12.89□□□□□ -0.35
SDHD-205ENST00000528048 MYH15Q9Y2K3 1946 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 NOL4O94818 638 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 HMGA1P17096 107 aaKnown RBP12.88□□□□□ -0.35
SDHD-205ENST00000528048 CD58P19256 250 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 COL9A1P20849 921 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 AVPR1AP37288 418 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 ASPAP45381 313 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 NLRP12P59046 1061 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
SDHD-205ENST00000528048 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDHD-205ENST00000528048 CCDC142Q17RM4 750 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 ARID3BQ8IVW6 561 aaPredicted RBP12.88□□□□□ -0.35
SDHD-205ENST00000528048 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
SDHD-205ENST00000528048 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 SDCBP2Q9H190 292 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 BRD9Q9H8M2 597 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
SDHD-205ENST00000528048 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
SDHD-205ENST00000528048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDHD-205ENST00000528048 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 F8VP50 259 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 CLDN5O00501 218 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 ZNF263O14978 683 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 P4HA2O15460 535 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 F11P03951 625 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 NUDT7P0C024 238 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 PSMC3P17980 439 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 VIPR2P41587 438 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 PPP3CCP48454 512 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 FMO5P49326 533 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 CYP4F8P98187 520 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 CBWD6Q4V339 395 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 SLC44A4Q53GD3 710 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 CBWD3Q5JTY5 395 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 CBWD5Q5RIA9 395 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 MON1AQ86VX9 555 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 MFSD6LQ8IWD5 586 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 IRF7Q92985 503 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 TRMT2BQ96GJ1 504 aaKnown RBP12.87□□□□□ -0.35
SDHD-205ENST00000528048 SMARCD1Q96GM5 515 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 MYRFLQ96LU7 910 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 BCO2Q9BYV7 579 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 ZNF518BQ9C0D4 1074 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 IL21Q9HBE4 155 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
SDHD-205ENST00000528048 TRPC7Q9HCX4 862 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 COQ4Q9Y3A0 265 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 NME7Q9Y5B8 376 aa12.87□□□□□ -0.35
SDHD-205ENST00000528048 HEPACAM2A8MVW5 462 aa12.86□□□□□ -0.35
SDHD-205ENST00000528048 AP1G2O75843 785 aa12.86□□□□□ -0.35
SDHD-205ENST00000528048 RTN3O95197 1032 aaPredicted RBP12.86□□□□□ -0.35
SDHD-205ENST00000528048 MBD3O95983 291 aa12.86□□□□□ -0.35
SDHD-205ENST00000528048 ABL1P00519 1130 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms