RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	ANO7	Q6IWH7	933 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	OSTM1	Q86WC4	334 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	RASSF3	Q86WH2	238 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	SFTPA1	Q8IWL2	248 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	ZSWIM2	Q8NEG5	633 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	DEFB124	Q8NES8	71 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	MDGA1	Q8NFP4	955 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	CXorf38	Q8TB03	319 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	SH3RF2	Q8TEC5	729 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	EXOC4	Q96A65	974 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	KIF2C	Q99661	725 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	ACBD6	Q9BR61	282 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEM206	Q9H813	350 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	DDX43	Q9NXZ2	648 aa	Known RBP	11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	GCNT4	Q9P109	453 aa		11.77	□□□□□ -0.53
RBM4-210	ENST00000528039	SRRM3	A6NNA2	597 aa	Predicted RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	ITGB3	P05106	788 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	KRT18	P05783	430 aa	Known RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	POLR2B	P30876	1174 aa	Known RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	DHPS	P49366	369 aa	Predicted RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	RPL10A	P62906	217 aa	Known RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	KCNA1	Q09470	495 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	MESP2	Q0VG99	397 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	UAP1L1	Q3KQV9	507 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	INTS6L	Q5JSJ4	861 aa	Known RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	SLFN12L	Q6IEE8	588 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	KIAA1211L	Q6NV74	962 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEM92	Q6UXU6	159 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	CYP2U1	Q7Z449	544 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	CCDC33	Q8N5R6	958 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	FRMD1	Q8N878	549 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	C1orf127	Q8N9H9	656 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	OLIG1	Q8TAK6	271 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	RLN3	Q8WXF3	142 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	POMGNT1	Q8WZA1	660 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	RAD54L	Q92698	747 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	CNOT6L	Q96LI5	555 aa	Known RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	AK8	Q96MA6	479 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	ZNF560	Q96MR9	790 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	ABCB6	Q9NP58	842 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	UXT	Q9UBK9	157 aa	Predicted RBP	11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	AGAP1	Q9UPQ3	857 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	CELSR3	Q9NYQ7	3312 aa		11.76	□□□□□ -0.53
RBM4-210	ENST00000528039	GCN1	Q92616	2671 aa	Known RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TULP1	O00294	542 aa	Predicted RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TBCA	O75347	108 aa	Known RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	IL18RAP	O95256	599 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	CHRM1	P11229	460 aa	Predicted RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	HDC	P19113	662 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	UBA7	P41226	1012 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	PNPLA4	P41247	253 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	PTGER3	P43115	390 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TFAM	Q00059	246 aa	Known RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	POU5F1	Q01860	360 aa	Known RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	KCNB1	Q14721	858 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	CRY1	Q16526	586 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	CFAP221	Q4G0U5	840 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	ARMCX6	Q7L4S7	300 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	ZNF720	Q7Z2F6	126 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TTC30A	Q86WT1	665 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	SCN4B	Q8IWT1	228 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	PIGK	Q92643	395 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	SAAL1	Q96ER3	474 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	CALML4	Q96GE6	196 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	FNBP1	Q96RU3	617 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	FAM213A	Q9BRX8	229 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	ST6GALNAC4	Q9H4F1	302 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEM74B	Q9NUR3	256 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	MMP17	Q9ULZ9	603 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	ARHGAP26	Q9UNA1	814 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	ABCA7	Q8IZY2	2146 aa		11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	FASN	P49327	2511 aa	Known RBP	11.75	□□□□□ -0.53
RBM4-210	ENST00000528039	TCHH	Q07283	1943 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEM8B	A6NDV4	472 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	LEFTY2	O00292	366 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	SLC26A4	O43511	780 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	HYAL3	O43820	417 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	HUS1	O60921	280 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	ATP2C2	O75185	946 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	PPP1R37	O75864	691 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	NFATC1	O95644	943 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	TCF3	P15923	654 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	ABCD1	P33897	745 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	SLC6A11	P48066	632 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	USP46	P62068	366 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	MYL7	Q01449	175 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	NR1H3	Q13133	447 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	TRIM61	Q5EBN2	209 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	C11orf74	Q86VG3	221 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	SFR1	Q86XK3	245 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	NT5DC4	Q86YG4	428 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEFF1	Q8IYR6	380 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	TMEM86A	Q8N2M4	240 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	ALLC	Q8N6M5	410 aa		11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	LARP4B	Q92615	738 aa	Known RBP	11.74	□□□□□ -0.53
RBM4-210	ENST00000528039	STRA6	Q9BX79	667 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms