RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 DRG1Q9Y295 367 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 IKBKGQ9Y6K9 419 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 COL2A1P02458 1487 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 HNRNPCL1O60812 293 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ESRRAP11474 423 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 GARTP22102 1010 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 VHLP40337 213 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ZRSR2Q15696 482 aaKnown RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ZACNQ401N2 412 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 TXNRD3NBQ6F5E7 133 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 RFX8Q6ZV50 586 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 PHF13Q86YI8 300 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-208ENST00000527323 ATP11CQ8NB49 1132 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SYT15Q9BQS2 421 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 VCXQ9H320 206 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 PPCSQ9HAB8 311 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 GINM1Q9NU53 330 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
CAPN1-208ENST00000527323 EXTL3O43909 919 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 KRT36O76013 467 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 ACADSP16219 412 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 GLRA2P23416 452 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 SERPINB3P29508 390 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 TUBP50607 506 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 KRT76Q01546 638 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 C1QBPQ07021 282 aaKnown RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 WDR72Q3MJ13 1102 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF394Q53GI3 561 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 EFHC2Q5JST6 749 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 SPIRE2Q8WWL2 714 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 RSAD2Q8WXG1 361 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 SH3GL3Q99963 347 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 TUBB6Q9BUF5 446 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 GBA2Q9HCG7 927 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 CCL15-CCL14A0A0B4J2E2 113 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 CAPN9O14815 690 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 SFNP31947 248 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 RCN2Q14257 317 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 CCL15Q16663 113 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 TFDP3Q5H9I0 405 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 PPFIBP2Q8ND30 876 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 TEKT4Q8WW24 435 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 PCDH9Q9HC56 1237 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 FBXO6Q9NRD1 293 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 LNPEPQ9UIQ6 1025 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
CAPN1-208ENST00000527323 PCDHA10Q9Y5I2 948 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
CAPN1-208ENST00000527323 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 GSC2O15499 205 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 LPXNO60711 386 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 C4BPAP04003 597 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SKIP12755 728 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 WNT7BP56706 349 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PGM5Q15124 567 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 KLHL38Q2WGJ6 581 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 FNBP1LQ5T0N5 605 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SWSAP1Q6NVH7 229 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 DRICH1Q6PGQ1 229 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PCGF5Q86SE9 256 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF398Q8TD17 642 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SCG3Q8WXD2 468 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 NTPCRQ9BSD7 190 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 TEX13BQ9BXU2 312 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 CLUHO75153 1309 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 NR3C2P08235 984 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 RFC5P40937 340 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 MCL1Q07820 350 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 SLC30A9Q6PML9 568 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 TMEM120AQ9BXJ8 343 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 CPA4Q9UI42 421 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
CAPN1-208ENST00000527323 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
CAPN1-208ENST00000527323 C19orf81C9J6K1 198 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms