RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CHORDC1Q9UHD1 332 aaPredicted RBP19.86■□□□□ 0.77
SMPD1-203ENST00000527275 GTF3C4Q9UKN8 822 aa19.86■□□□□ 0.77
SMPD1-203ENST00000527275 ARHGEF37A1IGU5 675 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 ATMINO43313 823 aaPredicted RBP19.85■□□□□ 0.77
SMPD1-203ENST00000527275 CEP104O60308 925 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 MTA2O94776 668 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 LAG3P18627 525 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 CCDC142Q17RM4 750 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 FIBCD1Q8N539 461 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 B3GALNT2Q8NCR0 500 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 TNIP3Q96KP6 325 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 RNPC3Q96LT9 517 aaKnown RBP19.85■□□□□ 0.77
SMPD1-203ENST00000527275 RBM12Q9NTZ6 932 aaKnown RBP19.85■□□□□ 0.77
SMPD1-203ENST00000527275 FAM49BQ9NUQ9 324 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 VWA8A3KMH1 1905 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 LCHNA4D1U4 455 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 ERLIN1O75477 346 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 VDRP11473 427 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 CDR1P51861 262 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 SGO2Q562F6 1265 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 PASD1Q8IV76 773 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 COLGALT1Q8NBJ5 622 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 KIAA1257Q9ULG3 409 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 ALG6Q9Y672 507 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 TSC2P49815 1807 aa19.85■□□□□ 0.77
SMPD1-203ENST00000527275 CHD7Q9P2D1 2997 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 SYN3O14994 580 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 CYP1A1P04798 512 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-203ENST00000527275 LINC00271P0C7V0 271 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 MCM3P25205 808 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 RABGGTBP53611 331 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 FAM109BQ6ICB4 259 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-203ENST00000527275 C11orf63Q6NUN7 778 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 TAS1R1Q7RTX1 841 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 SLC39A11Q8N1S5 342 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 SPATA18Q8TC71 538 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 ACTRT1Q8TDG2 376 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 CPA5Q8WXQ8 436 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 LRRC1Q9BTT6 524 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 NUP85Q9BW27 656 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 GRXCR1A8MXD5 290 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 O00370 1275 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 OAZ2O95190 189 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 FGFR3P22607 806 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 ELAVL2Q12926 359 aaKnown RBP19.84■□□□□ 0.77
SMPD1-203ENST00000527275 PPP1R26Q5T8A7 1209 aaPredicted RBP19.84■□□□□ 0.77
SMPD1-203ENST00000527275 OR10T2Q8NGX3 314 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 CYFIP2Q96F07 1278 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 VN1R3Q9BXE9 311 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 UVRAGQ9P2Y5 699 aa19.84■□□□□ 0.77
SMPD1-203ENST00000527275 CNOT8Q9UFF9 292 aaKnown RBP19.84■□□□□ 0.77
SMPD1-203ENST00000527275 PDE4DIPQ5VU43 2346 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 H0YGN5 161 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 DDX3YO15523 660 aaKnown RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 EFEMP2O95967 443 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 PTPN1P18031 435 aaKnown RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 PCSK1P29120 753 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 CNGA2Q16280 664 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 LONRF2Q1L5Z9 754 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 VARS2Q5ST30 1063 aaKnown RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 TRIM72Q6ZMU5 477 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 MCOLN2Q8IZK6 566 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 ZNF564Q8TBZ8 553 aaPredicted RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 SP7Q8TDD2 431 aaPredicted RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 CLP1Q92989 425 aaKnown RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 TMEM169Q96HH4 297 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 SYT15Q9BQS2 421 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 ACBD6Q9BR61 282 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 UBE2OQ9C0C9 1292 aaKnown RBP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 PCDHGC3Q9UN70 934 aa19.83■□□□□ 0.77
SMPD1-203ENST00000527275 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMPD1-203ENST00000527275 MED7O43513 233 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 ATP8B1O43520 1251 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 NSFP46459 744 aaKnown RBP19.83■□□□□ 0.76
SMPD1-203ENST00000527275 MESDQ14696 234 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 RTP2Q5QGT7 225 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 NAA35Q5VZE5 725 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 THEM5Q8N1Q8 247 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 GDF15Q99988 308 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 CRTAC1Q9NQ79 661 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 SPG21Q9NZD8 308 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 TSPAN16Q9UKR8 245 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 CDH9Q9ULB4 789 aa19.83■□□□□ 0.76
SMPD1-203ENST00000527275 MYBPHLA2RUH7 354 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 SPDYE4A6NLX3 237 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 TMEM110-MUSTN1A8MSY1 372 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 CCDC130P13994 396 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 MYOGP15173 224 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 CENPCQ03188 943 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 BEND6Q5SZJ8 279 aaPredicted RBP19.82■□□□□ 0.76
SMPD1-203ENST00000527275 RASGEF1CQ8N431 466 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 TMEM209Q96SK2 561 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 DNAI2Q9GZS0 605 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 AAASQ9NRG9 546 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 OGFRQ9NZT2 677 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 PCDHB12Q9Y5F1 795 aa19.82■□□□□ 0.76
SMPD1-203ENST00000527275 GLE1Q53GS7 698 aaKnown RBP19.81■□□□□ 0.76
SMPD1-203ENST00000527275 MDH1BQ5I0G3 518 aa19.81■□□□□ 0.76
SMPD1-203ENST00000527275 LCLAT1Q6UWP7 414 aa19.81■□□□□ 0.76
SMPD1-203ENST00000527275 RNF168Q8IYW5 571 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms