RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 ALDH1A2O94788 518 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 NFATC1O95644 943 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 HNRNPLP14866 589 aaKnown RBP eCLIP13.98□□□□□ -0.171e-9■■■□□ 15
CLNS1A-207ENST00000527133 ENGP17813 658 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 SCP2P22307 547 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 ACAT1P24752 427 aaKnown RBP13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 OPRD1P41143 372 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 PTGER3P43115 390 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 KCNB1Q14721 858 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 TMEM92Q6UXU6 159 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 TMEFF1Q8IYR6 380 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 PDCL2Q8N4E4 241 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 OLIG1Q8TAK6 271 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 SPACA7Q96KW9 195 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 ZNF560Q96MR9 790 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 ABCB6Q9NP58 842 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 TMEM74BQ9NUR3 256 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 AGO2Q9UKV8 859 aaKnown RBP13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 MSRB2Q9Y3D2 182 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 CELSR3Q9NYQ7 3312 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 GON4LQ3T8J9 2241 aa13.98□□□□□ -0.17
CLNS1A-207ENST00000527133 ATXN2Q99700 1313 aaKnown RBP13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 TNFRSF10BO14763 440 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 TRAK2O60296 914 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 HDCP19113 662 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 P2RY2P41231 377 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 ZNF131P52739 623 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 CCDC142Q17RM4 750 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 INTS6LQ5JSJ4 861 aaKnown RBP13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 SYT12Q8IV01 421 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 SFTPA1Q8IWL2 248 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 ALLCQ8N6M5 410 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 FRMD1Q8N878 549 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 FSIP1Q8NA03 581 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 FNBP1Q96RU3 617 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 ACBD6Q9BR61 282 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 FSCN3Q9NQT6 498 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 DDX43Q9NXZ2 648 aaKnown RBP13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 GTF3C4Q9UKN8 822 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 L1RE1Q9UN81 338 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 ARHGAP26Q9UNA1 814 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 PCNX2A6NKB5 2137 aa13.97□□□□□ -0.17
CLNS1A-207ENST00000527133 KLF8O95600 359 aaPredicted RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 CFIP05156 583 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 POLR2BP30876 1174 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 PNPLA4P41247 253 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 MRPS21P82921 87 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 GTF2BQ00403 316 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 MYL7Q01449 175 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 SEMA3BQ13214 749 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 GAB4Q2WGN9 574 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 LYSMD4Q5XG99 296 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 LMBRD2Q68DH5 695 aaPredicted RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 SLFN12LQ6IEE8 588 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 PIP4P1Q86T03 277 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 SPATA2LQ8IUW3 424 aaPredicted RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 TXNDC5Q8NBS9 432 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 LRRC15Q8TF66 581 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 PKMYT1Q99640 499 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 GTPBP2Q9BX10 602 aaKnown RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 IKZF4Q9H2S9 585 aa13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 MBD1Q9UIS9 605 aaPredicted RBP13.96□□□□□ -0.17
CLNS1A-207ENST00000527133 GCN1Q92616 2671 aaKnown RBP13.96□□□□□ -0.18
CLNS1A-207ENST00000527133 PTPRDP23468 1912 aa13.96□□□□□ -0.18
CLNS1A-207ENST00000527133 SGK1O00141 431 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 HCRTO43612 131 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 HUS1O60921 280 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 TBCAO75347 108 aaKnown RBP13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 TCF3P15923 654 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 ITPKAP23677 461 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 TIE1P35590 1138 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 ATXN3P54252 364 aaPredicted RBP13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 ZXDBP98169 803 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 MCTP1Q6DN14 999 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 SLC23A3Q6PIS1 610 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 CRELD2Q6UXH1 353 aaPredicted RBP13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 HDDC3Q8N4P3 179 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 IL17RCQ8NAC3 791 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 HMGB4Q8WW32 186 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 POMGNT1Q8WZA1 660 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 FIZ1Q96SL8 496 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 POLMQ9NP87 494 aaPredicted RBP13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 ZDHHC4Q9NPG8 344 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 AGAP1Q9UPQ3 857 aa13.95□□□□□ -0.18
CLNS1A-207ENST00000527133 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
CLNS1A-207ENST00000527133 PI4KAP42356 2102 aa13.94□□□□□ -0.18
CLNS1A-207ENST00000527133 ANAPC1Q9H1A4 1944 aa13.94□□□□□ -0.18
CLNS1A-207ENST00000527133 MYMKA6NI61 221 aa13.94□□□□□ -0.18
CLNS1A-207ENST00000527133 TAF4O00268 1085 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms